RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 MTCH1Q9NZJ7 389 aa12.11□□□□□ -0.47
NUP50-209ENST00000432340 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
NUP50-209ENST00000432340 SAMD4AQ9UPU9 718 aaKnown RBP12.11□□□□□ -0.47
NUP50-209ENST00000432340 ERGIC3Q9Y282 383 aa12.11□□□□□ -0.47
NUP50-209ENST00000432340 KBTBD11-OT1A0A1B0GTJ5 212 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 HSD17B6O14756 317 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 SH2D1BO14796 132 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 MOSP00540 346 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 IGLV1-40P01703 118 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 LGALS1P09382 135 aaKnown RBP12.1□□□□□ -0.47
NUP50-209ENST00000432340 CLUP10909 449 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 GDNFP39905 211 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 MAGOHP61326 146 aaKnown RBP12.1□□□□□ -0.47
NUP50-209ENST00000432340 SF3A3Q12874 501 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUP50-209ENST00000432340 PMS2P11Q13670 270 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 ZNF146Q15072 292 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 ZNF829Q3KNS6 432 aaPredicted RBP12.1□□□□□ -0.47
NUP50-209ENST00000432340 LCN12Q6JVE5 192 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 Q8N6K4 173 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 TMEM106AQ96A25 262 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 PBOV1Q9GZY1 135 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 FAM206AQ9NX38 181 aa12.1□□□□□ -0.47
NUP50-209ENST00000432340 ZNF107Q9UII5 783 aaPredicted RBP12.1□□□□□ -0.47
NUP50-209ENST00000432340 IGHV1-3A0A0C4DH29 117 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 FAM230AA0A1W2PPH8 454 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 DEDDO75618 318 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 HSPB1P04792 205 aaKnown RBP12.09□□□□□ -0.47
NUP50-209ENST00000432340 CSN2P05814 226 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 PPIFP30405 207 aaKnown RBP12.09□□□□□ -0.47
NUP50-209ENST00000432340 LIPEQ05469 1076 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 WDR93Q6P2C0 686 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 LINC00336Q6ZUF6 198 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 FAM58AQ8N1B3 248 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 SLAMF9Q96A28 289 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 KIRREL1Q96J84 757 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 C7orf34Q96L11 122 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 TEAD3Q99594 435 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 TSSK6Q9BXA6 273 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 SLC25A19Q9HC21 320 aa12.09□□□□□ -0.47
NUP50-209ENST00000432340 NUFIP1Q9UHK0 495 aaKnown RBP12.09□□□□□ -0.47
NUP50-209ENST00000432340 TRBV2A0A0J9YWF9 115 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 F8VVB4 439 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 F8VWA3 439 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 GMNNO75496 209 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 DIRAS1O95057 198 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 IGLV3-1P01715 115 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 CD1BP29016 333 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 AESQ08117 197 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 MFGE8Q08431 387 aaPredicted RBP12.08□□□□□ -0.48
NUP50-209ENST00000432340 KRBOX4Q5JUW0 171 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 SLC25A26Q70HW3 274 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 MCUR1Q96AQ8 359 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 OTULINQ96BN8 352 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 HSPB9Q9BQS6 159 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 CADM1Q9BY67 442 aaKnown RBP12.08□□□□□ -0.48
NUP50-209ENST00000432340 EXOSC4Q9NPD3 245 aaKnown RBP12.08□□□□□ -0.48
NUP50-209ENST00000432340 LAMP5Q9UJQ1 280 aa12.08□□□□□ -0.48
NUP50-209ENST00000432340 FAM90A10PA6NDY2 464 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 SIRPB1O00241 398 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 ZNF254O75437 659 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 GATBO75879 557 aaKnown RBP12.07□□□□□ -0.48
NUP50-209ENST00000432340 RGS11O94810 467 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 TPPPO94811 219 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 BRI3O95415 125 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 IL3RAP26951 378 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 C21orf33P30042 268 aaPredicted RBP12.07□□□□□ -0.48
NUP50-209ENST00000432340 FUT6P51993 359 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 RASSF6Q6ZTQ3 369 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 Q8N402 240 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 CHST4Q8NCG5 386 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 RGP1Q92546 391 aaPredicted RBP12.07□□□□□ -0.48
NUP50-209ENST00000432340 PARD6BQ9BYG5 372 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 MOB1AQ9H8S9 216 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 ING3Q9NXR8 418 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 FAM53CQ9NYF3 392 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 PSG11Q9UQ72 335 aa12.07□□□□□ -0.48
NUP50-209ENST00000432340 IGHV4OR15-8A0A075B7B6 117 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 A0A087WW49 117 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 TRAV41A0A0B4J266 112 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 NDUFB8O95169 186 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 SERPINA3P01011 423 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 ZP3P21754 424 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 RAB40BQ12829 278 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 LINC00322Q6ZN03 302 aaPredicted RBP12.06□□□□□ -0.48
NUP50-209ENST00000432340 HAPLN4Q86UW8 402 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 OR10A7Q8NGE5 316 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 DYDC1Q8WWB3 177 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 BORCS8Q96FH0 119 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 CMC2Q9NRP2 79 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 PLSCR3Q9NRY6 295 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 CMTM6Q9NX76 183 aa12.06□□□□□ -0.48
NUP50-209ENST00000432340 IGHV3-72A0A0B4J1Y9 119 aa12.05□□□□□ -0.48
NUP50-209ENST00000432340 TXNL1O43396 289 aa12.05□□□□□ -0.48
NUP50-209ENST00000432340 INMTO95050 263 aa12.05□□□□□ -0.48
NUP50-209ENST00000432340 OR2H2O95918 312 aa12.05□□□□□ -0.48
NUP50-209ENST00000432340 PRKACAP17612 351 aa12.05□□□□□ -0.48
NUP50-209ENST00000432340 DUSP1P28562 367 aa12.05□□□□□ -0.48
NUP50-209ENST00000432340 CD40LGP29965 261 aa12.05□□□□□ -0.48
NUP50-209ENST00000432340 RRM2P31350 389 aa12.05□□□□□ -0.48
NUP50-209ENST00000432340 APOFQ13790 326 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms