RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 GBX2P52951 348 aaPredicted RBP12.19□□□□□ -0.46
HERC3-206ENST00000431413 BDH1Q02338 343 aa12.19□□□□□ -0.46
HERC3-206ENST00000431413 AESQ08117 197 aa12.19□□□□□ -0.46
HERC3-206ENST00000431413 RAB40BQ12829 278 aa12.19□□□□□ -0.46
HERC3-206ENST00000431413 KISS1Q15726 138 aa12.19□□□□□ -0.46
HERC3-206ENST00000431413 NSUN5P1Q3KNT7 163 aa12.19□□□□□ -0.46
HERC3-206ENST00000431413 KLHL22Q53GT1 634 aa12.19□□□□□ -0.46
HERC3-206ENST00000431413 OR4P4Q8NGL7 312 aa12.19□□□□□ -0.46
HERC3-206ENST00000431413 OR5AK2Q8NH90 309 aa12.19□□□□□ -0.46
HERC3-206ENST00000431413 RHOXF1Q8NHV9 184 aa12.19□□□□□ -0.46
HERC3-206ENST00000431413 TSEN15Q8WW01 171 aaKnown RBP12.19□□□□□ -0.46
HERC3-206ENST00000431413 OR5M11Q96RB7 305 aa12.19□□□□□ -0.46
HERC3-206ENST00000431413 OR6C3Q9NZP0 311 aa12.19□□□□□ -0.46
HERC3-206ENST00000431413 RPL36Q9Y3U8 105 aaKnown RBP12.19□□□□□ -0.46
HERC3-206ENST00000431413 CMYA5Q8N3K9 4069 aa12.19□□□□□ -0.46
HERC3-206ENST00000431413 ODAMA1E959 279 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 E9PQ18 207 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 MMP23AO75900 390 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 ZFPL1O95159 310 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 CD28P10747 220 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 GLIPR1P48060 266 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 MTNR1BP49286 362 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 PRRX1P54821 245 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 BLCAPP62952 87 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 KRBOX4Q5JUW0 171 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 PRAMEF5Q5TYX0 476 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 PARP16Q8N5Y8 322 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 R3HDM4Q96D70 268 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 WNT10AQ9GZT5 417 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 ISG20L2Q9H9L3 353 aaKnown RBP12.18□□□□□ -0.46
HERC3-206ENST00000431413 AMBNQ9NP70 447 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 ERVK13-1Q9NX77 482 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 MYRFQ9Y2G1 1151 aa12.18□□□□□ -0.46
HERC3-206ENST00000431413 ZNF729A6NN14 1252 aaPredicted RBP12.17□□□□□ -0.46
HERC3-206ENST00000431413 G3V4G9 280 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 SLC33A1O00400 549 aaPredicted RBP12.17□□□□□ -0.46
HERC3-206ENST00000431413 GABRB1P18505 474 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 RAB3AP20336 220 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 MNDAP41218 407 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 ZNF691Q5VV52 312 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 CCDC144NLQ6NUI1 221 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 REC114Q7Z4M0 266 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 LYG1Q8N1E2 194 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 ZNF565Q8N9K5 539 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 GPER1Q99527 375 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 BARHL1Q9BZE3 327 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 LIN7BQ9HAP6 207 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 ING3Q9NXR8 418 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 AASSQ9UDR5 926 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 DSCAML1Q8TD84 2053 aa12.17□□□□□ -0.46
HERC3-206ENST00000431413 LOC100130705A0A1B0GUX0 176 aa12.16□□□□□ -0.46
HERC3-206ENST00000431413 OOSP1A8MZH6 123 aa12.16□□□□□ -0.46
HERC3-206ENST00000431413 IGLV1-47P01700 117 aa12.16□□□□□ -0.46
HERC3-206ENST00000431413 CD2P06729 351 aa12.16□□□□□ -0.46
HERC3-206ENST00000431413 JUNBP17275 347 aaPredicted RBP12.16□□□□□ -0.46
HERC3-206ENST00000431413 CD34P28906 385 aa12.16□□□□□ -0.46
HERC3-206ENST00000431413 ZP1P60852 638 aa12.16□□□□□ -0.46
HERC3-206ENST00000431413 ATXN7L3Q14CW9 347 aaPredicted RBP12.16□□□□□ -0.46
HERC3-206ENST00000431413 BEAN1Q3B7T3 259 aa12.16□□□□□ -0.46
HERC3-206ENST00000431413 SAMD5Q5TGI4 173 aa12.16□□□□□ -0.46
HERC3-206ENST00000431413 HIST2H2BDQ6DRA6 164 aa12.16□□□□□ -0.46
HERC3-206ENST00000431413 ELP2Q6IA86 826 aa12.16□□□□□ -0.46
HERC3-206ENST00000431413 Q6P435 159 aa12.16□□□□□ -0.46
HERC3-206ENST00000431413 PXT1Q8NFP0 134 aa12.16□□□□□ -0.46
HERC3-206ENST00000431413 CITED2Q99967 270 aaPredicted RBP12.16□□□□□ -0.46
HERC3-206ENST00000431413 PDCD1LG2Q9BQ51 273 aa12.16□□□□□ -0.46
HERC3-206ENST00000431413 KBTBD11-OT1A0A1B0GTJ5 212 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 H0YJX3 145 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 BUB1B-PAK6H3BSN5 160 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 M0QZK8 103 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 C21orf33P30042 268 aaPredicted RBP12.15□□□□□ -0.46
HERC3-206ENST00000431413 RBM39Q14498 530 aaKnown RBP12.15□□□□□ -0.46
HERC3-206ENST00000431413 CDK5R1Q15078 307 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 RSU1Q15404 277 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 HLA-DRB5Q30154 266 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 CCDC58Q4VC31 144 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 PAN3Q58A45 887 aaKnown RBP12.15□□□□□ -0.46
HERC3-206ENST00000431413 KPRPQ5T749 579 aaPredicted RBP12.15□□□□□ -0.46
HERC3-206ENST00000431413 RNF144BQ7Z419 303 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 CENPVQ7Z7K6 275 aaPredicted RBP12.15□□□□□ -0.46
HERC3-206ENST00000431413 SATL1Q86VE3 508 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 ZNF555Q8NEP9 628 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 OR5AU1Q8NGC0 362 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 OR52I1Q8NGK6 324 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 OR9G1Q8NH87 305 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 WIPF2Q8TF74 440 aaPredicted RBP12.15□□□□□ -0.46
HERC3-206ENST00000431413 COQ2Q96H96 371 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 NR1H4Q96RI1 486 aaPredicted RBP12.15□□□□□ -0.46
HERC3-206ENST00000431413 SLC25A33Q9BSK2 321 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 MMP28Q9H239 520 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 NCOR1P1Q9H4R4 102 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 ZNF286AQ9HBT8 521 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 PCDHB16Q9NRJ7 776 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 MRPS18AQ9NVS2 196 aaKnown RBP12.15□□□□□ -0.46
HERC3-206ENST00000431413 FAM118AQ9NWS6 357 aa12.15□□□□□ -0.46
HERC3-206ENST00000431413 AMMECR1Q9Y4X0 333 aaPredicted RBP12.15□□□□□ -0.46
HERC3-206ENST00000431413 MEIKINA0A087WXM9 373 aa12.14□□□□□ -0.47
HERC3-206ENST00000431413 A0A087X0M5 115 aa12.14□□□□□ -0.47
HERC3-206ENST00000431413 A0A1B0GX30 115 aa12.14□□□□□ -0.47
HERC3-206ENST00000431413 FAM172BPA6NC97 362 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms