RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 SOX8P57073 446 aa11.95□□□□□ -0.5
RBM39-212ENST00000429968 MALLQ13021 153 aa11.95□□□□□ -0.5
RBM39-212ENST00000429968 CEACAM21Q3KPI0 293 aa11.95□□□□□ -0.5
RBM39-212ENST00000429968 FBXW9Q5XUX1 488 aa11.95□□□□□ -0.5
RBM39-212ENST00000429968 FAM122CQ6P4D5 195 aa11.95□□□□□ -0.5
RBM39-212ENST00000429968 BVESQ8NE79 360 aa11.95□□□□□ -0.5
RBM39-212ENST00000429968 TMEM68Q96MH6 324 aa11.95□□□□□ -0.5
RBM39-212ENST00000429968 GPHA2Q96T91 129 aa11.95□□□□□ -0.5
RBM39-212ENST00000429968 INTS1Q8N201 2190 aaKnown RBP11.94□□□□□ -0.5
RBM39-212ENST00000429968 CST4P01036 141 aa11.94□□□□□ -0.5
RBM39-212ENST00000429968 OR5AC1P0C628 307 aa11.94□□□□□ -0.5
RBM39-212ENST00000429968 ARR3P36575 388 aa11.94□□□□□ -0.5
RBM39-212ENST00000429968 ERVS71-1P61550 626 aa11.94□□□□□ -0.5
RBM39-212ENST00000429968 OR2T2Q6IF00 324 aa11.94□□□□□ -0.5
RBM39-212ENST00000429968 PRSS54Q6PEW0 395 aa11.94□□□□□ -0.5
RBM39-212ENST00000429968 C17orf78Q8N4C9 275 aa11.94□□□□□ -0.5
RBM39-212ENST00000429968 EXTL1Q92935 676 aa11.94□□□□□ -0.5
RBM39-212ENST00000429968 NBEAQ8NFP9 2946 aa11.94□□□□□ -0.5
RBM39-212ENST00000429968 CIDEAO60543 219 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 ZNF728P0DKX0 622 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 ZP3P21754 424 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 AADACP22760 399 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 S100A10P60903 97 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 GGNBP1Q5YKI7 109 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 OR5L1Q8NGL2 311 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 LHFPL5Q8TAF8 219 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 TECTBQ96PL2 329 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 SLC25A32Q9H2D1 315 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 GP6Q9HCN6 339 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 RHBDL1O75783 438 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 FGF12P61328 243 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 CYCSP99999 105 aaKnown RBP11.93□□□□□ -0.5
RBM39-212ENST00000429968 SNTB1Q13884 538 aaKnown RBP11.93□□□□□ -0.5
RBM39-212ENST00000429968 TMEM187Q14656 261 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 HERPUD1Q15011 391 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 IAH1Q2TAA2 248 aaPredicted RBP11.93□□□□□ -0.5
RBM39-212ENST00000429968 ELP2Q6IA86 826 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 OR2A2Q6IF42 318 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 C20orf204Q6ZNR8 217 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 SGPP2Q8IWX5 399 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 OR5P3Q8WZ94 311 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 ZNF286AQ9HBT8 521 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 SLC2A9Q9NRM0 540 aa11.93□□□□□ -0.5
RBM39-212ENST00000429968 BSNQ9UPA5 3926 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 SCTP09683 121 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 IGHV1-2P23083 117 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 RBMXP38159 391 aaKnown RBP11.92□□□□□ -0.5
RBM39-212ENST00000429968 ALKBH6Q3KRA9 238 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 C1orf185Q5T7R7 199 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 HAGHLQ6PII5 290 aaPredicted RBP11.92□□□□□ -0.5
RBM39-212ENST00000429968 WDR86Q86TI4 376 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.92□□□□□ -0.5
RBM39-212ENST00000429968 SLC30A7Q8NEW0 376 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 RTN4IP1Q8WWV3 396 aaPredicted RBP11.92□□□□□ -0.5
RBM39-212ENST00000429968 C1orf123Q9NWV4 160 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 MSRB2Q9Y3D2 182 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 DCHS1Q96JQ0 3298 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 ATMQ13315 3056 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 IGHV3-64DA0A0J9YX35 117 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 LYZL6O75951 148 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 CA6P23280 308 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 PLP2Q04941 152 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 TMEM211Q6ICI0 200 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 LYZL2Q7Z4W2 148 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 TMEM178AQ8NBL3 297 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 MOB3AQ96BX8 217 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 SLC5A7Q9GZV3 580 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 NAA60Q9H7X0 242 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 RCC2Q9P258 522 aaKnown RBP11.92□□□□□ -0.5
RBM39-212ENST00000429968 CLCF1Q9UBD9 225 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 LHX6Q9UPM6 363 aa11.92□□□□□ -0.5
RBM39-212ENST00000429968 IGKV1-6A0A0C4DH72 117 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 NAPSAO96009 420 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 SELEP16581 610 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 ZNF14P17017 642 aaPredicted RBP11.91□□□□□ -0.5
RBM39-212ENST00000429968 RCC1P18754 421 aaPredicted RBP11.91□□□□□ -0.5
RBM39-212ENST00000429968 APLNRP35414 380 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 HOXA4Q00056 320 aaPredicted RBP11.91□□□□□ -0.5
RBM39-212ENST00000429968 PAN3Q58A45 887 aaKnown RBP11.91□□□□□ -0.5
RBM39-212ENST00000429968 CLEC9AQ6UXN8 241 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 TFAP2EQ6VUC0 442 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 HSD17B13Q7Z5P4 300 aaPredicted RBP11.91□□□□□ -0.5
RBM39-212ENST00000429968 LDLRAD3Q86YD5 345 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 OR1S2Q8NGQ3 325 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 STOML3Q8TAV4 291 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 GLYATL2Q8WU03 294 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 TMED6Q8WW62 240 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 BSCL2Q96G97 398 aaPredicted RBP11.91□□□□□ -0.5
RBM39-212ENST00000429968 AQP10Q96PS8 301 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 DMRT1Q9Y5R6 373 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 KIAA2026Q5HYC2 2103 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 CACNA1GO43497 2377 aa11.91□□□□□ -0.5
RBM39-212ENST00000429968 HKR1P10072 659 aa11.9□□□□□ -0.5
RBM39-212ENST00000429968 NUP62P37198 522 aaPredicted RBP11.9□□□□□ -0.5
RBM39-212ENST00000429968 ECI1P42126 302 aa11.9□□□□□ -0.5
RBM39-212ENST00000429968 ZNF674Q2M3X9 581 aa11.9□□□□□ -0.5
RBM39-212ENST00000429968 GALNT11Q8NCW6 608 aa11.9□□□□□ -0.5
RBM39-212ENST00000429968 OR10Z1Q8NGY1 313 aa11.9□□□□□ -0.5
RBM39-212ENST00000429968 MSI2Q96DH6 328 aaKnown RBP11.9□□□□□ -0.5
RBM39-212ENST00000429968 CNTNAP3BQ96NU0 1288 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms