RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ZNF133P52736 654 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 ESRRGP62508 458 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 DYNLL1P63167 89 aaKnown RBP1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 CCL7P80098 99 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 IFITM3Q01628 133 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 SMAGPQ0VAQ4 97 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 PNOCQ13519 176 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 PPP1R1AQ13522 171 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 ZNF235Q14590 738 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 CASP8Q14790 479 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 SMUG1Q53HV7 270 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 MPV17L2Q567V2 206 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 CLEC12AQ5QGZ9 265 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 CYB5R2Q6BCY4 276 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 DGAT2L6Q6ZPD8 337 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 FAM231DQ6ZW35 169 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 SLC16A13Q7RTY0 426 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 TRAPPC5Q8IUR0 188 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 PCP2Q8IVA1 136 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 ARIH2OSQ8N7S6 290 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 LINC01555Q8NAE3 123 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR52E4Q8NGH9 312 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR4C13Q8NGP0 309 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR1J4Q8NGS1 313 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR10G6Q8NH81 332 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 ERMNQ8TAM6 284 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 SRSF12Q8WXF0 261 aaKnown RBP1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 CCL17Q92583 94 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 CLDN23Q96B33 292 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 PPCDCQ96CD2 204 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 TLCD1Q96CP7 247 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 RBMXL1Q96E39 390 aaKnown RBP1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 SMIM8Q96KF7 97 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR10C1Q96KK4 312 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 CDX2Q99626 313 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 SUCNR1Q9BXA5 334 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 SLC22A4Q9H015 551 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 TPK1Q9H3S4 243 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 C8orf17Q9NRJ1 99 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 IL37Q9NZH6 218 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 RBM12B-AS1Q9P1G2 102 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 PRO0628Q9UI54 55 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 ZNF222Q9UK12 451 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 SAMHD1Q9Y3Z3 626 aaKnown RBP1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 C9orf84Q5VXU9 1444 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 ADAMTS13Q76LX8 1427 aa1.89□□□□□ -2.11
HMGB1P9-201ENST00000429856 NACAE9PAV3 2078 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 IGHV3-72A0A0B4J1Y9 119 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 A0A1B0GUA9 196 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 PINLYPA6NC86 204 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 NKX2-6A6NCS4 301 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 C8orf87E5RJ46 101 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 H3BP45 60 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 MANBAO00462 879 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 FFAR1O14842 300 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 ACOX3O15254 700 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 ZNF207O43670 478 aaKnown RBP1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 EPPINO95925 133 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 IGLV3-25P01717 112 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 IFNA16P05015 189 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 MRPL3P09001 348 aaKnown RBP1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 HIST1H1EP10412 219 aaKnown RBP1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 SPNP16150 400 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 G0S2P27469 103 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 RPL12P30050 165 aaKnown RBP1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 ADORA1P30542 326 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 PYCR1P32322 319 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 PMELP40967 661 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 GNG10P50151 68 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 RAP1GDS1P52306 607 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 CMC4P56277 68 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 TCL1AP56279 114 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 RANP62826 216 aaKnown RBP1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 ARG2P78540 354 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 LOXL1Q08397 574 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 PDK2Q15119 407 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 CLEC12BQ2HXU8 276 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 TMEM176BQ3YBM2 270 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 Q499Y3 187 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 TTMPQ5BVD1 217 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 RNASE13Q5GAN3 156 aaKnown RBP1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 TSPO2Q5TGU0 170 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 S100A7AQ86SG5 101 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 GATD1Q8NB37 220 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR1M1Q8NGA1 313 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR4K5Q8NGD3 323 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR5B17Q8NGF7 314 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR5W2Q8NH69 310 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 DCAKDQ8WVC6 231 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 SMIM12Q96EX1 92 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 PDXPQ96GD0 296 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 CAMK2N2Q96S95 79 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 DHRS9Q9BPW9 319 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 SELENOSQ9BQE4 189 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 ZNF649Q9BS31 505 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 SND1-IT1Q9HBX3 110 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 SLC2A9Q9NRM0 540 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 DMAC2Q9NW81 257 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 ZNF337Q9Y3M9 751 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms