RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 RAB40AQ8WXH6 277 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 ARHGAP5-AS1Q96IT6 56 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 FAAP24Q9BTP7 215 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 ANKRD20A5PA0PJZ0 165 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 LEUTXA8MZ59 168 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 G3V3Q6 166 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 LDLRAD4O15165 306 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 SLC22A5O76082 557 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 SWI5Q1ZZU3 235 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 FTMTQ8N4E7 242 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 ZNRF1Q8ND25 227 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 OR8H1Q8NGG4 311 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 S100A13Q99584 98 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 RTL8AQ9BWD3 113 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 TMEM59Q9BXS4 323 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 SAP30LQ9HAJ7 183 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 DNAJB11Q9UBS4 358 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 ZNF391Q9UJN7 358 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 SCP2D1Q9UJQ7 156 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 PPP1R3CQ9UQK1 317 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 MPC1Q9Y5U8 109 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 MAST4O15021 2626 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 DHRS7CA6NNS2 312 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 TMEM14DPA8MWL7 114 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 RAB27BO00194 218 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 NOS1APO75052 506 aaPredicted RBP8□□□□□ -1.13
HMGCLL1-206ENST00000428842 FCN3O75636 299 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 AP3S2P59780 193 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 TLE4Q04727 773 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 LGALSLQ3ZCW2 172 aaPredicted RBP8□□□□□ -1.13
HMGCLL1-206ENST00000428842 ESCO2Q56NI9 601 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 LHFPL2Q6ZUX7 228 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 NKAIN3Q8N8D7 197 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 ZNF680Q8NEM1 530 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 EMG1Q92979 244 aaKnown RBP8□□□□□ -1.13
HMGCLL1-206ENST00000428842 MARVELD3Q96A59 401 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 SPSB1Q96BD6 273 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 DHRS9Q9BPW9 319 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 DCTN5Q9BTE1 182 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 PLEKHF2Q9H8W4 249 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 PLEKHA6Q9Y2H5 1048 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 ETV7Q9Y603 341 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 RFPL4AA6NLU0 287 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 RFPL4AL1F8VTS6 287 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 PSPNO60542 156 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 NXPH2O95156 264 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 CSTBP04080 98 aaKnown RBP8□□□□□ -1.13
HMGCLL1-206ENST00000428842 AMY2BP19961 511 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 PRKACBP22694 351 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 DNASE1P24855 282 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 BLVRBP30043 206 aaPredicted RBP8□□□□□ -1.13
HMGCLL1-206ENST00000428842 MECP2P51608 486 aaKnown RBP8□□□□□ -1.13
HMGCLL1-206ENST00000428842 ART1P52961 327 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 SCAND1P57086 179 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 SELENOVP59797 346 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 FAM76BQ5HYJ3 339 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 TMEM69Q5SWH9 247 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 OR52W1Q6IF63 320 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 C20orf204Q6ZNR8 217 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 PNLDC1Q8NA58 520 aaKnown RBP8□□□□□ -1.13
HMGCLL1-206ENST00000428842 BEST4Q8NFU0 473 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 OR4S1Q8NGB4 309 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 FCAMRQ8WWV6 532 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 S100A16Q96FQ6 103 aaKnown RBP8□□□□□ -1.13
HMGCLL1-206ENST00000428842 PSMG3-AS1Q96PY0 264 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 CITED4Q96RK1 184 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 MICU1Q9BPX6 476 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 ZNF436Q9C0F3 470 aaPredicted RBP8□□□□□ -1.13
HMGCLL1-206ENST00000428842 ZNF442Q9H7R0 627 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 DECR2Q9NUI1 292 aa8□□□□□ -1.13
HMGCLL1-206ENST00000428842 SETD2Q9BYW2 2564 aaPredicted RBP7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 SSNA1O43805 119 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 IGHV3-7P01780 117 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 GYPAP02724 150 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 CFPP27918 469 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 ATXN7L3Q14CW9 347 aaPredicted RBP7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 C3orf36Q3SXR2 165 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 UTF1Q5T230 341 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 METTL11BQ5VVY1 283 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 LYPD2Q6UXB3 125 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 NLRC3Q7RTR2 1065 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 FAM90A1Q86YD7 464 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 ZNF525Q8N782 197 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 MAPK1IP1LQ8NDC0 245 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 OR4D10Q8NGI6 311 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 C15orf40Q8WUR7 153 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 MED30Q96HR3 178 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 SULT4A1Q9BR01 284 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 OR10A4Q9H209 315 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 CXXC4Q9H2H0 198 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 PPA2Q9H2U2 334 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 FLVCR2Q9UPI3 526 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 HIVEP1P15822 2718 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 IGKV1D-8A0A087WSZ0 117 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 MEGF11A6BM72 1044 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 TRAPPC2LH3BP13 241 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 TSC22D2O75157 780 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 CSN2P05814 226 aa7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 ERCC1P07992 297 aaPredicted RBP7.99□□□□□ -1.13
HMGCLL1-206ENST00000428842 COX6B1P14854 86 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms