RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 KRBOX4Q5JUW0 171 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 RTN4RL2Q86UN3 420 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 ZNF596Q8TC21 504 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 TSEN15Q8WW01 171 aaKnown RBP13.68□□□□□ -0.22
TRIM39-209ENST00000428728 CAPSLQ8WWF8 208 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 COQ2Q96H96 371 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 SLC25A33Q9BSK2 321 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 PPIL3Q9H2H8 161 aaKnown RBP13.68□□□□□ -0.22
TRIM39-209ENST00000428728 ISG20L2Q9H9L3 353 aaKnown RBP13.68□□□□□ -0.22
TRIM39-209ENST00000428728 TAS2R3Q9NYW6 316 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 MYRFQ9Y2G1 1151 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 NOTCH3Q9UM47 2321 aa13.68□□□□□ -0.22
TRIM39-209ENST00000428728 E9PQ18 207 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 H3BUI4 141 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 SLC33A1O00400 549 aaPredicted RBP13.67□□□□□ -0.22
TRIM39-209ENST00000428728 SULT1B1O43704 296 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 BRS3P32247 399 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 GLP1RP43220 463 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 ARHGDIBP52566 201 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 BDH1Q02338 343 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 RBM39Q14498 530 aaKnown RBP13.67□□□□□ -0.22
TRIM39-209ENST00000428728 Q6P435 159 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 C16orf82Q7Z2V1 217 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 SAXO1Q8IYX7 474 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 OR5AU1Q8NGC0 362 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 OR4D6Q8NGJ1 314 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 STMN2Q93045 179 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 AKR1E2Q96JD6 320 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 OCSTAMPQ9BR26 566 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 AMBNQ9NP70 447 aa13.67□□□□□ -0.22
TRIM39-209ENST00000428728 SH2D7A6NKC9 451 aaPredicted RBP13.66□□□□□ -0.22
TRIM39-209ENST00000428728 LEUTXA8MZ59 168 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 E9PI62 339 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 TOR1AO14656 332 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 DEGS1O15121 323 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 ZFPL1O95159 310 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 IGLV1-47P01700 117 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 CSN2P05814 226 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 GABRB1P18505 474 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 NFYBP25208 207 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 LMO1P25800 156 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 CD34P28906 385 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 ZP1P60852 638 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 KISS1Q15726 138 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 ZSCAN26Q16670 478 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 HLA-DRB5Q30154 266 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 ABCA11PQ4W5N1 156 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 UTF1Q5T230 341 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 ZFP1Q6P2D0 407 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 Q6ZPA2 131 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 SYS1Q8N2H4 156 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 CHST4Q8NCG5 386 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 OR5AK2Q8NH90 309 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 SGCDQ92629 289 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 CORO2AQ92828 525 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 NR1H4Q96RI1 486 aaPredicted RBP13.66□□□□□ -0.22
TRIM39-209ENST00000428728 PDCD1LG2Q9BQ51 273 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 LIN7BQ9HAP6 207 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 DHDHQ9UQ10 334 aa13.66□□□□□ -0.22
TRIM39-209ENST00000428728 TMEM212A6NML5 194 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 H0YJX3 145 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 PIN1P1O15428 100 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 LPLP06858 475 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 CEACAM3P40198 252 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 OR3A4PP47883 348 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 CDK5R1Q15078 307 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 TPTE2P1Q5T6R2 138 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 ZNF691Q5VV52 312 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 SERPINA12Q8IW75 414 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 OR5D14Q8NGL3 314 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 MRAPQ8TCY5 172 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 PHF21AQ96BD5 680 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 RHOFQ9HBH0 211 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 ERVK13-1Q9NX77 482 aa13.65□□□□□ -0.22
TRIM39-209ENST00000428728 ZNF729A6NN14 1252 aaPredicted RBP13.64□□□□□ -0.23
TRIM39-209ENST00000428728 BUB1B-PAK6H3BSN5 160 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 FADS2O95864 444 aaKnown RBP13.64□□□□□ -0.23
TRIM39-209ENST00000428728 CCDC159P0C7I6 412 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 PF4V1P10720 104 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 CD33P20138 364 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 MTNR1BP49286 362 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 C17orf58Q2M2W7 97 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 PAN3Q58A45 887 aaKnown RBP13.64□□□□□ -0.23
TRIM39-209ENST00000428728 KHDC1LQ5JSQ8 128 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 C9orf152Q5JTZ5 239 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 CCDC121Q6ZUS5 278 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 REC114Q7Z4M0 266 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 CENPVQ7Z7K6 275 aaPredicted RBP13.64□□□□□ -0.23
TRIM39-209ENST00000428728 PARP16Q8N5Y8 322 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 OR51A2Q8NGJ7 313 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 OR52I1Q8NGK6 324 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 MYCBPQ99417 103 aaPredicted RBP13.64□□□□□ -0.23
TRIM39-209ENST00000428728 GPER1Q99527 375 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 FAM192AQ9GZU8 254 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 OR6C3Q9NZP0 311 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 KIF25Q9UIL4 384 aa13.64□□□□□ -0.23
TRIM39-209ENST00000428728 GABRPO00591 440 aa13.63□□□□□ -0.23
TRIM39-209ENST00000428728 OR2F2O95006 317 aa13.63□□□□□ -0.23
TRIM39-209ENST00000428728 IGHV3-7P01780 117 aa13.63□□□□□ -0.23
TRIM39-209ENST00000428728 SOX2P48431 317 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms