RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 HLA-DOBP13765 273 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 CPN1P15169 458 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 EFNB2P52799 333 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 RPL11P62913 178 aaKnown RBP9.31□□□□□ -0.92
TCOF1-204ENST00000427724 LPCAT3Q6P1A2 487 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 MOB3BQ86TA1 216 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 MUC15Q8N387 334 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF709Q8N972 641 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 OR10D4PQ8NGN7 298 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 OR1S1Q8NH92 325 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 KIAA1456Q9P272 454 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 TMEM272A0A1B0GTI8 110 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 GNB1P62873 340 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 MESTQ5EB52 335 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 HIST2H3PS2Q5TEC6 136 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 GPR157Q5UAW9 335 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 NUFIP2Q7Z417 695 aaKnown RBP9.31□□□□□ -0.92
TCOF1-204ENST00000427724 SSC4DQ8WTU2 575 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 FAM212BQ9NTI7 297 aaPredicted RBP9.31□□□□□ -0.92
TCOF1-204ENST00000427724 GAR1Q9NY12 217 aaKnown RBP9.31□□□□□ -0.92
TCOF1-204ENST00000427724 FER1L5A0AVI2 2057 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 OR4C45A6NMZ5 311 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF354AO60765 605 aaPredicted RBP9.31□□□□□ -0.92
TCOF1-204ENST00000427724 EIF3GO75821 320 aaKnown RBP eCLIP9.31□□□□□ -0.92
TCOF1-204ENST00000427724 TUSC2O75896 110 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 OR4A8P0C604 315 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 GTF3C1Q12789 2109 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 PDCD1Q15116 288 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 PRR30Q53SZ7 412 aaPredicted RBP9.31□□□□□ -0.92
TCOF1-204ENST00000427724 AADACL3Q5VUY0 350 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 C17orf82Q86X59 251 aaPredicted RBP9.31□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF703Q9H7S9 590 aaPredicted RBP9.31□□□□□ -0.92
TCOF1-204ENST00000427724 BCO1Q9HAY6 547 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 PPP1R14DQ9NXH3 145 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 DOCK10Q96BY6 2186 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 TP53BP1Q12888 1972 aaPredicted RBP9.3□□□□□ -0.92
TCOF1-204ENST00000427724 PIN1P1O15428 100 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 KLF4O43474 513 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 DNPH1O43598 174 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 IFNA2P01563 188 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 FGF2P09038 288 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 TAGLN2P37802 199 aaKnown RBP9.3□□□□□ -0.92
TCOF1-204ENST00000427724 DHRS2Q13268 280 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF600Q6ZNG1 722 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF695Q8IW36 515 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 OR8B3Q8NGG8 313 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 OR8B2Q96RD0 313 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 OR2J1Q9GZK6 312 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 CHST6Q9GZX3 395 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 UQCC1Q9NVA1 299 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF230Q9UIE0 474 aaPredicted RBP9.3□□□□□ -0.92
TCOF1-204ENST00000427724 TRGV10A0A0A0MS01 117 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 KCNAB3O43448 404 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 ARG1P05089 322 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 GAS1P54826 345 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 ZP1P60852 638 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 PJVKQ0ZLH3 352 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 LDLRAD3Q86YD5 345 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 YAE1D1Q9NRH1 226 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 ICAM5Q9UMF0 924 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 IGKV3-11P04433 115 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 TFAP2EQ6VUC0 442 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 SKA3Q8IX90 412 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 OR51A2Q8NGJ7 313 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 ADAMTS17Q8TE56 1095 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 SLC25A38Q96DW6 304 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 TMEM68Q96MH6 324 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 TUBG2Q9NRH3 451 aa9.3□□□□□ -0.92
TCOF1-204ENST00000427724 TRAV38-1A0A0B4J264 116 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 IGHV3-13P01766 116 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 IGHV3-7P01780 117 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 APOA2P02652 100 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 IL11P20809 199 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 CATR1Q13166 79 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 HMGN3Q15651 99 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 IAH1Q2TAA2 248 aaPredicted RBP9.29□□□□□ -0.92
TCOF1-204ENST00000427724 GLYATL2Q8WU03 294 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 MEGF10Q96KG7 1140 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 FLVCR1Q9Y5Y0 555 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 ANKHD1Q8IWZ3 2542 aaKnown RBP9.29□□□□□ -0.92
TCOF1-204ENST00000427724 CD300LBA8K4G0 201 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 FAM157AC9JC47 383 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 E9PLN8 166 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 SPRY1O43609 319 aaPredicted RBP9.29□□□□□ -0.92
TCOF1-204ENST00000427724 OMGP23515 440 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 NPBWR1P48145 328 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 FBXW12Q6X9E4 464 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 GVQW1Q8N7I0 195 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 VKORC1Q9BQB6 163 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 TMPRSS5Q9H3S3 457 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 ZCCHC4Q9H5U6 513 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 MOB1AQ9H8S9 216 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 MED9Q9NWA0 146 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 RASL12Q9NYN1 266 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 PLCE1Q9P212 2302 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 CHRM2P08172 466 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 TAS2R46P59540 309 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 FOXO1Q12778 655 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 Q3ZCU0 254 aa9.29□□□□□ -0.92
TCOF1-204ENST00000427724 PHLDA2Q53GA4 152 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms