RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 C12orf54Q6X4T0 127 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 GTF2H5Q6ZYL4 71 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 MRGPREQ86SM8 312 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 D2HGDHQ8N465 521 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 ORAI1Q96D31 301 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 LNP1A1A4G5 178 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 GP1BAP07359 652 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 LIFP15018 202 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 SNRPD3P62318 126 aaKnown RBP5.07□□□□□ -1.6
HERC4-206ENST00000427635 PDZD11Q5EBL8 140 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 RHBDD2Q6NTF9 364 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 CLEC18BQ6UXF7 455 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 ZNF696Q9H7X3 374 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 UQCC1Q9NVA1 299 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 UGT2A1Q9Y4X1 527 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 HILPDAQ9Y5L2 63 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 LEUTXA8MZ59 168 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 NPFFO15130 113 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 CRHP06850 196 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 CCL2P13500 99 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 HTN3P15516 51 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 RPS4XP62701 263 aaKnown RBP5.07□□□□□ -1.6
HERC4-206ENST00000427635 RIGQ13278 110 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 CD226Q15762 336 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 NKG7Q16617 165 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 PMS2CLQ68D20 193 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 TMEM101Q96IK0 257 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 ZNF714Q96N38 554 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 GPA33Q99795 319 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 METTL17Q9H7H0 456 aaPredicted RBP5.07□□□□□ -1.6
HERC4-206ENST00000427635 ELOVL5Q9NYP7 299 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 IGKV3D-15A0A087WSY6 115 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 PATE3B3GLJ2 98 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 HMGN4O00479 90 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 CCSO14618 274 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 PHOX2AO14813 284 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 IGKV3-15P01624 115 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 GYPAP02724 150 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 CTSLP07711 333 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 ACSM4P0C7M7 580 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 ANKRD55Q3KP44 614 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 SLC35E4Q6ICL7 350 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 ZNF562Q6V9R5 426 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 Q6ZNB5 142 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 ZNF534Q76KX8 674 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 LRRTM1Q86UE6 522 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 TMEM123Q8N131 208 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 FAM168AQ92567 244 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 C11orf54Q9H0W9 315 aaPredicted RBP5.07□□□□□ -1.6
HERC4-206ENST00000427635 PEMTQ9UBM1 199 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 MYH6P13533 1939 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 TPRP12270 2363 aaKnown RBP5.07□□□□□ -1.6
HERC4-206ENST00000427635 SHPRHQ149N8 1683 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 VIRMAQ69YN4 1812 aaKnown RBP5.07□□□□□ -1.6
HERC4-206ENST00000427635 FITM1A5D6W6 292 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 RGS13O14921 159 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 OR2C1O95371 312 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 SMIM6P0DI80 62 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 CCL4P13236 92 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 HIST1H1BP16401 226 aaKnown RBP5.07□□□□□ -1.6
HERC4-206ENST00000427635 OR2F1Q13607 317 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 RAB32Q13637 225 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 COX19Q49B96 90 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 SPANXN1Q5VSR9 72 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 ZNF547Q8IVP9 402 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 SMRP1Q8NCR6 262 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 RFESDQ8TAC1 157 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 TEAD3Q99594 435 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 SLC25A19Q9HC21 320 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 PRNDQ9UKY0 176 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 ZDHHC8Q9ULC8 765 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 B9D1Q9UPM9 204 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 TRAPPC4Q9Y296 219 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 TOGARAM1Q9Y4F4 1720 aa5.07□□□□□ -1.6
HERC4-206ENST00000427635 LALBAP00709 142 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 VSIG10L2P0DP72 767 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 ZNF25P17030 456 aaPredicted RBP5.06□□□□□ -1.6
HERC4-206ENST00000427635 CCR2P41597 374 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 CSRP2Q16527 193 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 SH2D5Q6ZV89 423 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 LYG2Q86SG7 212 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 GLRX5Q86SX6 157 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 MDP1Q86V88 176 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 RPS4Y2Q8TD47 263 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 ZG16BQ96DA0 208 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 SNRNP40Q96DI7 357 aaKnown RBP5.06□□□□□ -1.6
HERC4-206ENST00000427635 SPACA5Q96QH8 159 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 ABHD14AQ9BUJ0 271 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 TTTY12Q9BZ98 90 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 ALX4Q9H161 411 aaPredicted RBP5.06□□□□□ -1.6
HERC4-206ENST00000427635 GEMIN7Q9H840 131 aaKnown RBP5.06□□□□□ -1.6
HERC4-206ENST00000427635 MMP25Q9NPA2 562 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 M0R3E3 92 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 NDUFA2O43678 99 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 DHRS3O75911 302 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 ZNF205O95201 554 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 VDAC2P45880 294 aaPredicted RBP5.06□□□□□ -1.6
HERC4-206ENST00000427635 HCCSP53701 268 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 PRSS8Q16651 343 aa5.06□□□□□ -1.6
HERC4-206ENST00000427635 C1orf220Q5T0J3 134 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms