RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 VAMP1P23763 118 aa22.54■■□□□ 1.2
SH3GL3-202ENST00000427482 CD40P25942 277 aa22.54■■□□□ 1.2
SH3GL3-202ENST00000427482 Q5BKY6 102 aa22.54■■□□□ 1.2
SH3GL3-202ENST00000427482 DCAF12L2Q5VW00 463 aa22.54■■□□□ 1.2
SH3GL3-202ENST00000427482 C11orf88Q6PI97 169 aa22.54■■□□□ 1.2
SH3GL3-202ENST00000427482 TMEM171Q8WVE6 324 aa22.54■■□□□ 1.2
SH3GL3-202ENST00000427482 WDR89Q96FK6 387 aaPredicted RBP22.54■■□□□ 1.2
SH3GL3-202ENST00000427482 MEMO1Q9Y316 297 aa22.54■■□□□ 1.2
SH3GL3-202ENST00000427482 SHANK1Q9Y566 2161 aa22.54■■□□□ 1.2
SH3GL3-202ENST00000427482 HS3ST1O14792 307 aa22.53■■□□□ 1.2
SH3GL3-202ENST00000427482 DEGS1O15121 323 aa22.53■■□□□ 1.2
SH3GL3-202ENST00000427482 DUS4LO95620 317 aaKnown RBP22.53■■□□□ 1.2
SH3GL3-202ENST00000427482 PI3P19957 117 aa22.53■■□□□ 1.2
SH3GL3-202ENST00000427482 RBM39Q14498 530 aaKnown RBP22.53■■□□□ 1.2
SH3GL3-202ENST00000427482 ASB13Q8WXK3 278 aa22.53■■□□□ 1.2
SH3GL3-202ENST00000427482 RDH5Q92781 318 aa22.53■■□□□ 1.2
SH3GL3-202ENST00000427482 RIMS4Q9H426 269 aaPredicted RBP22.53■■□□□ 1.2
SH3GL3-202ENST00000427482 OPN4Q9UHM6 478 aa22.53■■□□□ 1.2
SH3GL3-202ENST00000427482 DUSP13Q9UII6 198 aa22.53■■□□□ 1.2
SH3GL3-202ENST00000427482 CHD3Q12873 2000 aaKnown RBP22.53■■□□□ 1.2
SH3GL3-202ENST00000427482 PGAM2P15259 253 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 ZNF44P15621 663 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 KLF3P57682 345 aaPredicted RBP22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 RPS23P62266 143 aaKnown RBP22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 MZT1Q08AG7 82 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 ZNF146Q15072 292 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 LY6G6FQ5SQ64 297 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 PRAMEF6Q5VXH4 476 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 PHB2Q99623 299 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 TMEM246Q9BRR3 403 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 PAIP2BQ9ULR5 123 aaKnown RBP22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 TRGV8A0A0C4DH27 118 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 PPP3CBP16298 524 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 SPIN3Q5JUX0 258 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 ZNF826PQ6ZT77 177 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 DHRS9Q9BPW9 319 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 HSPB11Q9Y547 144 aa22.52■■□□□ 1.2
SH3GL3-202ENST00000427482 IGLV3-9A0A075B6K5 115 aa22.51■■□□□ 1.19
SH3GL3-202ENST00000427482 TRBV6-6A0A0A6YYG2 114 aa22.51■■□□□ 1.19
SH3GL3-202ENST00000427482 A6NLC8 198 aa22.51■■□□□ 1.19
SH3GL3-202ENST00000427482 GLRA1P23415 457 aa22.51■■□□□ 1.19
SH3GL3-202ENST00000427482 CASP6P55212 293 aa22.51■■□□□ 1.19
SH3GL3-202ENST00000427482 ST6GALNAC3Q8NDV1 305 aa22.51■■□□□ 1.19
SH3GL3-202ENST00000427482 OR5M8Q8NGP6 311 aa22.51■■□□□ 1.19
SH3GL3-202ENST00000427482 MRPL30Q8TCC3 161 aaKnown RBP22.51■■□□□ 1.19
SH3GL3-202ENST00000427482 CASTOR1Q8WTX7 329 aa22.51■■□□□ 1.19
SH3GL3-202ENST00000427482 C14orf166Q9Y224 244 aaKnown RBP22.51■■□□□ 1.19
SH3GL3-202ENST00000427482 PCNX1Q96RV3 2341 aa22.51■■□□□ 1.19
SH3GL3-202ENST00000427482 PIEZO1Q92508 2521 aa22.51■■□□□ 1.19
SH3GL3-202ENST00000427482 OR2H2O95918 312 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 GMFBP60983 142 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 LPCAT3Q6P1A2 487 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 VHLLQ6RSH7 139 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 TMEM108Q6UXF1 575 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 WDR82Q6UXN9 313 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 SSX8Q7RTT4 187 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 GRPEL2Q8TAA5 225 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 TMPRSS13Q9BYE2 586 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 FXYD6Q9H0Q3 95 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 PRORYQ9H606 182 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 SLC23A1Q9UHI7 598 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 RGS13O14921 159 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 SLC34A2O95436 690 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 SFT2D2O95562 160 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 CTSDP07339 412 aaPredicted RBP22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 HLA-GP17693 338 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 CD200P41217 278 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 CA7P43166 264 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 FIP1L1Q6UN15 594 aaKnown RBP22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 OR2Z1Q8NG97 314 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 SYT3Q9BQG1 590 aa22.5■■□□□ 1.19
SH3GL3-202ENST00000427482 ZSCAN5BA6NJL1 495 aa22.49■■□□□ 1.19
SH3GL3-202ENST00000427482 SIRPB1O00241 398 aa22.49■■□□□ 1.19
SH3GL3-202ENST00000427482 SLC33A1O00400 549 aaPredicted RBP22.49■■□□□ 1.19
SH3GL3-202ENST00000427482 THBDP07204 575 aa22.49■■□□□ 1.19
SH3GL3-202ENST00000427482 FCGR2CP31995 323 aa22.49■■□□□ 1.19
SH3GL3-202ENST00000427482 MDH2P40926 338 aaKnown RBP22.49■■□□□ 1.19
SH3GL3-202ENST00000427482 GLP1RP43220 463 aa22.49■■□□□ 1.19
SH3GL3-202ENST00000427482 SUPT4H1P63272 117 aaKnown RBP22.49■■□□□ 1.19
SH3GL3-202ENST00000427482 PAN3Q58A45 887 aaKnown RBP22.49■■□□□ 1.19
SH3GL3-202ENST00000427482 LIN54Q6MZP7 749 aa22.49■■□□□ 1.19
SH3GL3-202ENST00000427482 WFDC8Q8IUA0 241 aa22.49■■□□□ 1.19
SH3GL3-202ENST00000427482 UFSP2Q9NUQ7 469 aa22.49■■□□□ 1.19
SH3GL3-202ENST00000427482 SH2D1BO14796 132 aa22.48■■□□□ 1.19
SH3GL3-202ENST00000427482 RGS11O94810 467 aa22.48■■□□□ 1.19
SH3GL3-202ENST00000427482 ZNF205O95201 554 aa22.48■■□□□ 1.19
SH3GL3-202ENST00000427482 RPS2P15880 293 aaKnown RBP22.48■■□□□ 1.19
SH3GL3-202ENST00000427482 PTAFRP25105 342 aa22.48■■□□□ 1.19
SH3GL3-202ENST00000427482 SNRPD2P62316 118 aaKnown RBP22.48■■□□□ 1.19
SH3GL3-202ENST00000427482 SHEQ5VZ18 495 aa22.48■■□□□ 1.19
SH3GL3-202ENST00000427482 ZNF880Q6PDB4 577 aa22.48■■□□□ 1.19
SH3GL3-202ENST00000427482 NUP37Q8NFH4 326 aa22.48■■□□□ 1.19
SH3GL3-202ENST00000427482 TREM2Q9NZC2 230 aa22.48■■□□□ 1.19
SH3GL3-202ENST00000427482 ATP23Q9Y6H3 246 aa22.48■■□□□ 1.19
SH3GL3-202ENST00000427482 KIR2DS1A0A191URI9 304 aa22.47■■□□□ 1.19
SH3GL3-202ENST00000427482 TRDCB7Z8K6 153 aa22.47■■□□□ 1.19
SH3GL3-202ENST00000427482 PTBP3O95758 552 aaKnown RBP22.47■■□□□ 1.19
SH3GL3-202ENST00000427482 KIR2DS4P43632 304 aa22.47■■□□□ 1.19
SH3GL3-202ENST00000427482 KIR2DS1Q14954 304 aa22.47■■□□□ 1.19
SH3GL3-202ENST00000427482 IGSF11Q5DX21 431 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms