RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SPRY3O43610 288 aa12.83□□□□□ -0.35
PTPN13-203ENST00000427191 HBZP02008 142 aa12.83□□□□□ -0.35
PTPN13-203ENST00000427191 RAB32Q13637 225 aa12.83□□□□□ -0.35
PTPN13-203ENST00000427191 SNX22Q96L94 193 aa12.83□□□□□ -0.35
PTPN13-203ENST00000427191 SMIM14Q96QK8 99 aa12.83□□□□□ -0.35
PTPN13-203ENST00000427191 OR2V2Q96R30 315 aa12.83□□□□□ -0.35
PTPN13-203ENST00000427191 SYNGR2O43760 224 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 CLPPQ16740 277 aaPredicted RBP12.83□□□□□ -0.36
PTPN13-203ENST00000427191 C10orf113Q5VZT2 155 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 SLC25A40Q8TBP6 338 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 PIPOXQ9P0Z9 390 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 ARAP2Q8WZ64 1704 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 TRGV8A0A0C4DH27 118 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 HPXP02790 462 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 CD40P25942 277 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 SAP30LQ9HAJ7 183 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 TNFAIP6P98066 277 aaPredicted RBP12.83□□□□□ -0.36
PTPN13-203ENST00000427191 PABPC1L2AQ5JQF8 200 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 VN1R1Q9GZP7 353 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 KCNMB2Q9Y691 235 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 LMX1BO60663 402 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 JOSD1Q15040 202 aaPredicted RBP12.83□□□□□ -0.36
PTPN13-203ENST00000427191 WDR38Q5JTN6 314 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 TM4SF19Q96DZ7 209 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 CCDC144NLQ6NUI1 221 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 RFLNAQ6ZTI6 216 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 C4orf45Q96LM5 186 aa12.83□□□□□ -0.36
PTPN13-203ENST00000427191 CABIN1Q9Y6J0 2220 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 FCMRO60667 390 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 COL19A1Q14993 1142 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 ZNF770Q6IQ21 691 aaPredicted RBP12.82□□□□□ -0.36
PTPN13-203ENST00000427191 ADAT3Q96EY9 351 aaPredicted RBP12.82□□□□□ -0.36
PTPN13-203ENST00000427191 IFITM10A6NMD0 228 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 NKX2-2O95096 273 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 MMP9P14780 707 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 LSM6P62312 80 aaKnown RBP12.82□□□□□ -0.36
PTPN13-203ENST00000427191 TTC32Q5I0X7 151 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 R3HDM4Q96D70 268 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 CTXND1A0A1B0GTU2 59 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 ORM2P19652 201 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 MAFAQ8NHW3 353 aaPredicted RBP12.82□□□□□ -0.36
PTPN13-203ENST00000427191 PMCHL2Q9BQD1 86 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 VCX2Q9H322 139 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 LNP1A1A4G5 178 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 OR4B1Q8NGF8 309 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 ZNF764Q96H86 408 aaPredicted RBP12.82□□□□□ -0.36
PTPN13-203ENST00000427191 ING1Q9UK53 422 aaPredicted RBP12.82□□□□□ -0.36
PTPN13-203ENST00000427191 KCNE1BA0A087WTH5 132 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 NPIPB6E9PJ23 425 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 ZFPL1O95159 310 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 GBGT1Q8N5D6 347 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 OR6X1Q8NH79 312 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 PITX3O75364 302 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 TNFSF15O95150 251 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 WNT1P04628 370 aa12.82□□□□□ -0.36
PTPN13-203ENST00000427191 APC2O95996 2303 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 PPIHO43447 177 aaKnown RBP12.81□□□□□ -0.36
PTPN13-203ENST00000427191 MPDU1O75352 247 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 SERF2P84101 59 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 GUCA2AQ02747 115 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 PRO1933Q9H354 126 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 HMX2A2RU54 273 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 TMEM210A6NLX4 147 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 GZMHP20718 246 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 PCMT1P22061 227 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 H1FOOQ8IZA3 346 aaPredicted RBP12.81□□□□□ -0.36
PTPN13-203ENST00000427191 OR8B3Q8NGG8 313 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 OR8B2Q96RD0 313 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 CDX2Q99626 313 aaPredicted RBP12.81□□□□□ -0.36
PTPN13-203ENST00000427191 ZNF318Q5VUA4 2279 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 SRSF10O75494 262 aaKnown RBP12.81□□□□□ -0.36
PTPN13-203ENST00000427191 CD82P27701 267 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 KLHDC9Q8NEP7 349 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 DHRS7CA6NNS2 312 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 CA2P00918 260 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 SEMG1P04279 462 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 HYAL1Q12794 435 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 WDFY1Q8IWB7 410 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 FBXL6Q8N531 539 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 SF3B5Q9BWJ5 86 aaKnown RBP12.81□□□□□ -0.36
PTPN13-203ENST00000427191 HOXC4P09017 264 aaPredicted RBP12.81□□□□□ -0.36
PTPN13-203ENST00000427191 TEPPQ6URK8 271 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 SPEM1Q8N4L4 309 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 LILRA3Q8N6C8 439 aaPredicted RBP12.81□□□□□ -0.36
PTPN13-203ENST00000427191 C6orf106Q9H6K1 298 aaPredicted RBP12.81□□□□□ -0.36
PTPN13-203ENST00000427191 LAMB2P55268 1798 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 F2RL2O00254 374 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 IGLV3-25P01717 112 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 ANKRD36A6QL64 1941 aa12.81□□□□□ -0.36
PTPN13-203ENST00000427191 LINC01553A4QN01 128 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 UBE2V2Q15819 145 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 IGHV3-15A0A0B4J1V0 119 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 SEC11BP0C7V7 166 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 C19orf54Q5BKX5 351 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 TMEM179BQ7Z7N9 219 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 PLSCR3Q9NRY6 295 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 LIPGQ9Y5X9 500 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 GABRA1P14867 456 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 SP6Q3SY56 376 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 OR4C12Q96R67 309 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms