RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 MRPS15P82914 257 aaKnown RBP13.2□□□□□ -0.3
SCRN1-205ENST00000425819 STUMQ69YW2 141 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 LYSMD2Q8IV50 215 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 ASCC1Q8N9N2 400 aaKnown RBP13.2□□□□□ -0.3
SCRN1-205ENST00000425819 CMSS1Q9BQ75 279 aaKnown RBP13.2□□□□□ -0.3
SCRN1-205ENST00000425819 CHST6Q9GZX3 395 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 ZNF222Q9UK12 451 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 TRAV38-1A0A0B4J264 116 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 TMEM82A0PJX8 343 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 F12P00748 615 aaPredicted RBP13.2□□□□□ -0.3
SCRN1-205ENST00000425819 AMY2BP19961 511 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 LMO1P25800 156 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 SSTR2P30874 369 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 EFNA4P52798 201 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 MRPS11P82912 194 aaKnown RBP13.2□□□□□ -0.3
SCRN1-205ENST00000425819 ZMYND11Q15326 602 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 CARTPTQ16568 116 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 ZNF57Q68EA5 555 aaPredicted RBP13.2□□□□□ -0.3
SCRN1-205ENST00000425819 ZNF787Q6DD87 383 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 GVQW1Q8N7I0 195 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 CCL13Q99616 98 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 PALMDQ9NP74 551 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 ETAA1Q9NY74 926 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 MTFP1Q9UDX5 166 aa13.2□□□□□ -0.3
SCRN1-205ENST00000425819 TENM4Q6N022 2769 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 A0A1B0GW55 424 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 CA11O75493 328 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 GLAP06280 429 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 DUX4L2P0CJ85 424 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 DUX4L3P0CJ86 424 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 DUX4L4P0CJ87 422 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 DUX4L5P0CJ88 424 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 DUX4L6P0CJ89 424 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 DUX4L7P0CJ90 424 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 KRTAP10-9P60411 292 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 BTG1P62324 171 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 RBM39Q14498 530 aaKnown RBP13.19□□□□□ -0.3
SCRN1-205ENST00000425819 ATXN7L3Q14CW9 347 aaPredicted RBP13.19□□□□□ -0.3
SCRN1-205ENST00000425819 AVPI1Q5T686 147 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 DUX4L9Q6RFH8 374 aaPredicted RBP13.19□□□□□ -0.3
SCRN1-205ENST00000425819 OR4S1Q8NGB4 309 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 PLPPR1Q8TBJ4 325 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 MAFIPQ8WZ33 124 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 CHMP1AQ9HD42 196 aaPredicted RBP13.19□□□□□ -0.3
SCRN1-205ENST00000425819 IFT46Q9NQC8 304 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 ZNF701Q9NV72 531 aaPredicted RBP13.19□□□□□ -0.3
SCRN1-205ENST00000425819 DUX4Q9UBX2 424 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 ZNF230Q9UIE0 474 aaPredicted RBP13.19□□□□□ -0.3
SCRN1-205ENST00000425819 RBMX2Q9Y388 322 aaKnown RBP13.19□□□□□ -0.3
SCRN1-205ENST00000425819 DSCAMO60469 2012 aa13.19□□□□□ -0.3
SCRN1-205ENST00000425819 SELLP14151 372 aa13.18□□□□□ -0.3
SCRN1-205ENST00000425819 OR3A1P47881 315 aa13.18□□□□□ -0.3
SCRN1-205ENST00000425819 C17orf107Q6ZR85 190 aa13.18□□□□□ -0.3
SCRN1-205ENST00000425819 PEG10Q86TG7 708 aaKnown RBP13.18□□□□□ -0.3
SCRN1-205ENST00000425819 TOMM5Q8N4H5 51 aa13.18□□□□□ -0.3
SCRN1-205ENST00000425819 FAM216BQ8N7L0 139 aa13.18□□□□□ -0.3
SCRN1-205ENST00000425819 ZNRF1Q8ND25 227 aa13.18□□□□□ -0.3
SCRN1-205ENST00000425819 GAFA1Q96PS6 74 aa13.18□□□□□ -0.3
SCRN1-205ENST00000425819 ST6GALNAC5Q9BVH7 336 aa13.18□□□□□ -0.3
SCRN1-205ENST00000425819 ZNF665Q9H7R5 613 aa13.18□□□□□ -0.3
SCRN1-205ENST00000425819 SEBOXQ9HB31 216 aaPredicted RBP13.18□□□□□ -0.3
SCRN1-205ENST00000425819 TMEM165Q9HC07 324 aa13.18□□□□□ -0.3
SCRN1-205ENST00000425819 C12orf4Q9NQ89 552 aa13.18□□□□□ -0.3
SCRN1-205ENST00000425819 MAB21L2Q9Y586 359 aa13.18□□□□□ -0.3
SCRN1-205ENST00000425819 USP9YO00507 2555 aaPredicted RBP13.18□□□□□ -0.3
SCRN1-205ENST00000425819 TANC2Q9HCD6 1990 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 ISPDA4D126 451 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 NKX6-3A6NJ46 265 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 PPIHO43447 177 aaKnown RBP13.17□□□□□ -0.3
SCRN1-205ENST00000425819 ZNF737O75373 536 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 IGHV4-39P01824 125 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 ACTBP60709 375 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 ACTG1P63261 375 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 ZNF788Q6ZQV5 615 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 SETD6Q8TBK2 473 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 SDSLQ96GA7 329 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 OCSTAMPQ9BR26 566 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 TMEM246Q9BRR3 403 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 CHODLQ9H9P2 273 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 MYOZ1Q9NP98 299 aaPredicted RBP13.17□□□□□ -0.3
SCRN1-205ENST00000425819 TBC1D24Q9ULP9 559 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 UTP20O75691 2785 aaKnown RBP13.17□□□□□ -0.3
SCRN1-205ENST00000425819 DOPEY2Q9Y3R5 2298 aa13.17□□□□□ -0.3
SCRN1-205ENST00000425819 IGHV2-70P01814 119 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 FCGR3AP08637 254 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 GSTT2BP0CG30 244 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 RCVRNP35243 200 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 CBX5P45973 191 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 SSBP1Q04837 148 aaKnown RBP13.16□□□□□ -0.3
SCRN1-205ENST00000425819 KLF9Q13886 244 aaPredicted RBP13.16□□□□□ -0.3
SCRN1-205ENST00000425819 GRK1Q15835 563 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 OR52W1Q6IF63 320 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 LYPD2Q6UXB3 125 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 Q6ZPA2 131 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 ZNF561Q8N587 486 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 TMEM185AQ8NFB2 350 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 TIMD4Q96H15 378 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 SNX22Q96L94 193 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 SHARPINQ9H0F6 387 aa13.16□□□□□ -0.3
SCRN1-205ENST00000425819 HELZ2Q9BYK8 2649 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms