RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TIMD4Q96H15 378 aa8.68□□□□□ -1.02
MDC1-205ENST00000425072 SNX22Q96L94 193 aa8.68□□□□□ -1.02
MDC1-205ENST00000425072 PSMG3-AS1Q96PY0 264 aa8.68□□□□□ -1.02
MDC1-205ENST00000425072 CMSS1Q9BQ75 279 aaKnown RBP8.68□□□□□ -1.02
MDC1-205ENST00000425072 WDR13Q9H1Z4 485 aa8.68□□□□□ -1.02
MDC1-205ENST00000425072 ZNF665Q9H7R5 613 aa8.68□□□□□ -1.02
MDC1-205ENST00000425072 ZMAT3Q9HA38 289 aaKnown RBP8.68□□□□□ -1.02
MDC1-205ENST00000425072 RCC2Q9P258 522 aaKnown RBP8.68□□□□□ -1.02
MDC1-205ENST00000425072 MTFP1Q9UDX5 166 aa8.68□□□□□ -1.02
MDC1-205ENST00000425072 TMEM235A6NFC5 223 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 MFNGO00587 321 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 WNT9BO14905 357 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 ORC5O43913 435 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 OR2H2O95918 312 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 CSF1P09603 554 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 IL7P13232 177 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 DAOP14920 347 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 GABRA2P47869 451 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 PDCD1Q15116 288 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 BAK1Q16611 211 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 SRSF7Q16629 238 aaKnown RBP eCLIP8.67□□□□□ -1.02
MDC1-205ENST00000425072 PAN3Q58A45 887 aaKnown RBP8.67□□□□□ -1.02
MDC1-205ENST00000425072 SHEQ5VZ18 495 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 ZNF57Q68EA5 555 aaPredicted RBP8.67□□□□□ -1.02
MDC1-205ENST00000425072 SFRP4Q6FHJ7 346 aaPredicted RBP8.67□□□□□ -1.02
MDC1-205ENST00000425072 MZT2BQ6NZ67 158 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 SLC36A1Q7Z2H8 476 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 TRAPPC6BQ86SZ2 158 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 ZNF295-AS1Q8N0V1 137 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 ZNF561Q8N587 486 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 OR52I2Q8NH67 350 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 ANGPTL6Q8NI99 470 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 SETD6Q8TBK2 473 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 YIPF5Q969M3 257 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 COX4I2Q96KJ9 171 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 SDHCQ99643 169 aaPredicted RBP8.67□□□□□ -1.02
MDC1-205ENST00000425072 C7orf50Q9BRJ6 194 aaKnown RBP8.67□□□□□ -1.02
MDC1-205ENST00000425072 DPCDQ9BVM2 203 aaPredicted RBP8.67□□□□□ -1.02
MDC1-205ENST00000425072 BARX1Q9HBU1 254 aaPredicted RBP8.67□□□□□ -1.02
MDC1-205ENST00000425072 IFT46Q9NQC8 304 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 MGAT4AQ9UM21 535 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 KCNK7Q9Y2U2 307 aa8.67□□□□□ -1.02
MDC1-205ENST00000425072 TRAV24A0A0B4J272 114 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 UBE2QL1A1L167 161 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 NAP1L6A6NFF2 107 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 SLC33A1O00400 549 aaPredicted RBP8.66□□□□□ -1.02
MDC1-205ENST00000425072 DTYMKP23919 212 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 RCVRNP35243 200 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 FAUP35544 74 aaKnown RBP8.66□□□□□ -1.02
MDC1-205ENST00000425072 DGCR2P98153 550 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 COL10A1Q03692 680 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 DYRK1AQ13627 763 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 MUC20Q8N307 709 aaPredicted RBP8.66□□□□□ -1.02
MDC1-205ENST00000425072 TMEM229BQ8NBD8 167 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 DEFB108BQ8NET1 73 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 OR5T2Q8NGG2 359 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 SDSLQ96GA7 329 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 CCL19Q99731 98 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 SULT4A1Q9BR01 284 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 ST6GALNAC5Q9BVH7 336 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 FAM234AQ9H0X4 552 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 NCOR1P1Q9H4R4 102 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 CHODLQ9H9P2 273 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 TMEM165Q9HC07 324 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 ETAA1Q9NY74 926 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 KLK11Q9UBX7 282 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 AK3Q9UIJ7 227 aa8.66□□□□□ -1.02
MDC1-205ENST00000425072 RBMX2Q9Y388 322 aaKnown RBP8.66□□□□□ -1.02
MDC1-205ENST00000425072 RAI1Q7Z5J4 1906 aaPredicted RBP8.66□□□□□ -1.02
MDC1-205ENST00000425072 MEIOCA2RUB1 952 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 NKX6-3A6NJ46 265 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.65□□□□□ -1.02
MDC1-205ENST00000425072 K7N7A8 449 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 SIRPB1O00241 398 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 MGST3O14880 152 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 EGR1P18146 543 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 TBPP20226 339 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 GDNFP39905 211 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 TAS2R19P59542 299 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 BTG1P62324 171 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 IL13RA1P78552 427 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 STEAP3Q658P3 488 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 SLC35E4Q6ICL7 350 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 BRICD5Q6PL45 260 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 ZNF788Q6ZQV5 615 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 HOGA1Q86XE5 327 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 LYSMD2Q8IV50 215 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 BPIFB2Q8N4F0 458 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 ZNF565Q8N9K5 539 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 CHMP1AQ9HD42 196 aaPredicted RBP8.65□□□□□ -1.02
MDC1-205ENST00000425072 C12orf4Q9NQ89 552 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 IL36RNQ9UBH0 155 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 KAAG1Q9UBP8 84 aa8.65□□□□□ -1.02
MDC1-205ENST00000425072 LRBAP50851 2863 aa8.64□□□□□ -1.03
MDC1-205ENST00000425072 IGKV1D-17A0A075B6S4 117 aa8.64□□□□□ -1.03
MDC1-205ENST00000425072 IGHV3OR15-7A0A075B7D8 119 aa8.64□□□□□ -1.03
MDC1-205ENST00000425072 TRBV6-6A0A0A6YYG2 114 aa8.64□□□□□ -1.03
MDC1-205ENST00000425072 A0A1W2PQ09 198 aa8.64□□□□□ -1.03
MDC1-205ENST00000425072 ANKRD20A5PA0PJZ0 165 aa8.64□□□□□ -1.03
MDC1-205ENST00000425072 ZNF736B4DX44 427 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms