RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PNRC1Q12796 327 aaPredicted RBP13.15□□□□□ -0.3
C9orf3-204ENST00000424143 NMSQ5H8A3 153 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 ACER2Q5QJU3 275 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 ZNF610Q8N9Z0 462 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 RAB39BQ96DA2 213 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 ST3GAL6Q9Y274 331 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 ZNF816-ZNF321PA0A0X1KG74 233 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 FAM24AA6NFZ4 105 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 PROB1E7EW31 1015 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 BCAT2O15382 392 aaPredicted RBP13.14□□□□□ -0.31
C9orf3-204ENST00000424143 SPRY1O43609 319 aaPredicted RBP13.14□□□□□ -0.31
C9orf3-204ENST00000424143 DFFBO76075 338 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 GNRHRP30968 328 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 NPBWR2P48146 333 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 UBE2KP61086 200 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 VAMP2P63027 116 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 ICAM4Q14773 271 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 PCOLCEQ15113 449 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 ELOBQ15370 118 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 CLEC9AQ6UXN8 241 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 ZNF695Q8IW36 515 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 M1APQ8TC57 530 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 OR6C1Q96RD1 312 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 ZNF700Q9H0M5 742 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 RIMS4Q9H426 269 aaPredicted RBP13.14□□□□□ -0.31
C9orf3-204ENST00000424143 PUS1Q9Y606 427 aaKnown RBP eCLIP13.14□□□□□ -0.31
C9orf3-204ENST00000424143 KIAA1549Q9HCM3 1950 aa13.14□□□□□ -0.31
C9orf3-204ENST00000424143 TIAF1O95411 115 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 S100A2P29034 98 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 TAGLN2P37802 199 aaKnown RBP13.13□□□□□ -0.31
C9orf3-204ENST00000424143 RND2P52198 227 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 FOXL2P58012 376 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 TAS2R30P59541 319 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 OR2B8PP59922 312 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 CHAF1BQ13112 559 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 TSPO2Q5TGU0 170 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 ZNF429Q86V71 674 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 OR5D13Q8NGL4 314 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 CLDND2Q8NHS1 167 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 KCNE4Q8WWG9 221 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 IMMP1LQ96LU5 166 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 SIGLEC12Q96PQ1 595 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 RARRES2Q99969 163 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 NIPSNAP3BQ9BS92 247 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 PROK2Q9HC23 129 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 GAR1Q9NY12 217 aaKnown RBP13.13□□□□□ -0.31
C9orf3-204ENST00000424143 RNF150Q9ULK6 438 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 UBE2J1Q9Y385 318 aaPredicted RBP13.13□□□□□ -0.31
C9orf3-204ENST00000424143 CEP192Q8TEP8 1941 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 TRBV6-6A0A0A6YYG2 114 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 CBR3O75828 277 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 NAPSAO96009 420 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 LCATP04180 440 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 TK1P04183 234 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 RPS10P46783 165 aaKnown RBP13.13□□□□□ -0.31
C9orf3-204ENST00000424143 CCL20P78556 96 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 TGIF1Q15583 401 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 PPP1R3BQ86XI6 285 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 H1FOOQ8IZA3 346 aaPredicted RBP13.13□□□□□ -0.31
C9orf3-204ENST00000424143 IL22RA1Q8N6P7 574 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 OR11L1Q8NGX0 322 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 ATP5SQ99766 215 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 DUSP23Q9BVJ7 150 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 PRDM14Q9GZV8 571 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 Q9N2K0 584 aa13.13□□□□□ -0.31
C9orf3-204ENST00000424143 ASXL3Q9C0F0 2248 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 A0A0J9YW62 118 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 KIR2DS1A0A191URI9 304 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 H0Y980 276 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 KIR2DS4P43632 304 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 ZNF92Q03936 586 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 KIR2DS1Q14954 304 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 PIGYQ3MUY2 71 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 DMRTC1Q5HYR2 192 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 AKR1C8PQ5T2L2 129 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 DBX2Q6ZNG2 339 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 TBC1D26Q86UD7 250 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 PLPPR1Q8TBJ4 325 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 TMEM171Q8WVE6 324 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 MBD3L1Q8WWY6 194 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 RCC1LQ96I51 464 aaKnown RBP13.12□□□□□ -0.31
C9orf3-204ENST00000424143 DOK5Q9P104 306 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 MRPS17Q9Y2R5 130 aaKnown RBP13.12□□□□□ -0.31
C9orf3-204ENST00000424143 WSB1Q9Y6I7 421 aa13.12□□□□□ -0.31
C9orf3-204ENST00000424143 C5orf42Q9H799 3197 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 LOC102723971A0A1B0GUV8 181 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 LRP5LA4QPB2 252 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 FGF5P12034 268 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 DLK1P80370 383 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 DAZAP2Q15038 168 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-204ENST00000424143 MPV17LQ2QL34 196 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 OR2B11Q5JQS5 317 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 ZNF774Q6NX45 483 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 Q6ZPA2 131 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 COLCA1Q6ZS62 124 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 LINC00596Q86U02 117 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 ODF3L1Q8IXM7 274 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 OR5C1Q8NGR4 320 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 AKR7LQ8NHP1 331 aa13.11□□□□□ -0.31
C9orf3-204ENST00000424143 UCN2Q96RP3 112 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms