RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 HES4Q9HCC6 221 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 SLC23A1Q9UHI7 598 aa17.75■□□□□ 0.43
GPC1-202ENST00000420138 TRAV24A0A0B4J272 114 aa17.74■□□□□ 0.43
GPC1-202ENST00000420138 TPD52L2O43399 206 aaKnown RBP17.74■□□□□ 0.43
GPC1-202ENST00000420138 IFNA6P05013 189 aa17.74■□□□□ 0.43
GPC1-202ENST00000420138 TAS2R46P59540 309 aa17.74■□□□□ 0.43
GPC1-202ENST00000420138 TSPAN5P62079 268 aa17.74■□□□□ 0.43
GPC1-202ENST00000420138 TLE1Q04724 770 aa17.74■□□□□ 0.43
GPC1-202ENST00000420138 LHFPL1Q86WI0 220 aa17.74■□□□□ 0.43
GPC1-202ENST00000420138 Q8IYB0 196 aa17.74■□□□□ 0.43
GPC1-202ENST00000420138 POC1AQ8NBT0 407 aa17.74■□□□□ 0.43
GPC1-202ENST00000420138 C12orf4Q9NQ89 552 aa17.74■□□□□ 0.43
GPC1-202ENST00000420138 ANXA10Q9UJ72 324 aa17.74■□□□□ 0.43
GPC1-202ENST00000420138 NBASA2RRP1 2371 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 SDCBPO00560 298 aaPredicted RBP17.73■□□□□ 0.43
GPC1-202ENST00000420138 GOSR2O14653 212 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 SNAPC5O75971 98 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 PTBP3O95758 552 aaKnown RBP17.73■□□□□ 0.43
GPC1-202ENST00000420138 PPP3CBP16298 524 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 HOXA4Q00056 320 aaPredicted RBP17.73■□□□□ 0.43
GPC1-202ENST00000420138 DHODHQ02127 395 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 BSPH1Q075Z2 132 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 CDSNQ15517 529 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 C2orf68Q2NKX9 166 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 WDR82Q6UXN9 313 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 C12orf45Q8N5I9 185 aaPredicted RBP17.73■□□□□ 0.43
GPC1-202ENST00000420138 GALNT11Q8NCW6 608 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 TERB2Q8NHR7 220 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 ASB13Q8WXK3 278 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 CADP27708 2225 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 RELNP78509 3460 aa17.73■□□□□ 0.43
GPC1-202ENST00000420138 CEACAM18A8MTB9 384 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 ABCD4O14678 606 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 NAPSAO96009 420 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 UBE2MP61081 183 aaKnown RBP17.72■□□□□ 0.43
GPC1-202ENST00000420138 RPS23P62266 143 aaKnown RBP17.72■□□□□ 0.43
GPC1-202ENST00000420138 AADACL3Q5VUY0 350 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 C17orf107Q6ZR85 190 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 SUMF2Q8NBJ7 301 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 FAM90A27PA6NNH2 459 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 CD200P41217 278 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 OR3A3P47888 321 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 ZNF81P51508 661 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 H2BFSP57053 126 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 ZNF146Q15072 292 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 CHRFAM7AQ494W8 412 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 SLC25A42Q86VD7 318 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 OR2Z1Q8NG97 314 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 OR8H1Q8NGG4 311 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 TMPRSS13Q9BYE2 586 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 PPA2Q9H2U2 334 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 EHFQ9NZC4 300 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 OPN4Q9UHM6 478 aa17.72■□□□□ 0.43
GPC1-202ENST00000420138 SMG1Q96Q15 3661 aaKnown RBP17.72■□□□□ 0.43
GPC1-202ENST00000420138 SLC22A5O76082 557 aa17.71■□□□□ 0.43
GPC1-202ENST00000420138 RGS11O94810 467 aa17.71■□□□□ 0.43
GPC1-202ENST00000420138 SIX6O95475 246 aa17.71■□□□□ 0.43
GPC1-202ENST00000420138 GNLYP22749 145 aa17.71■□□□□ 0.43
GPC1-202ENST00000420138 RBMXP38159 391 aaKnown RBP17.71■□□□□ 0.43
GPC1-202ENST00000420138 UQCRFS1P47985 274 aa17.71■□□□□ 0.43
GPC1-202ENST00000420138 SPRNQ5BIV9 151 aa17.71■□□□□ 0.43
GPC1-202ENST00000420138 ZNF660Q6AZW8 331 aaPredicted RBP17.71■□□□□ 0.43
GPC1-202ENST00000420138 MRPL24Q96A35 216 aaKnown RBP17.71■□□□□ 0.43
GPC1-202ENST00000420138 SPACA1Q9HBV2 294 aa17.71■□□□□ 0.43
GPC1-202ENST00000420138 ERRFI1Q9UJM3 462 aaPredicted RBP17.71■□□□□ 0.43
GPC1-202ENST00000420138 PLSCR5A0PG75 271 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 HSPB6O14558 160 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 WNT9BO14905 357 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 HTR2BP41595 481 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 DHRS2Q13268 280 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 C11orf88Q6PI97 169 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 WDR89Q96FK6 387 aaPredicted RBP17.7■□□□□ 0.42
GPC1-202ENST00000420138 WDR13Q9H1Z4 485 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 LIME1Q9H400 295 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 HEXA-AS1Q9H8Q6 139 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 UFSP2Q9NUQ7 469 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 TAAR3PQ9P1P4 343 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 NKX2-6A6NCS4 301 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 MCRIP1C9JLW8 97 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 HS3ST1O14792 307 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 NXPH2O95156 264 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 GLAP06280 429 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 C4BPBP20851 252 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 GRNP28799 593 aaKnown RBP17.7■□□□□ 0.42
GPC1-202ENST00000420138 GMFBP60983 142 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 FAHD2BQ6P2I3 314 aaPredicted RBP17.7■□□□□ 0.42
GPC1-202ENST00000420138 TEX261Q6UWH6 196 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 Q6ZS49 121 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 MARCH1Q8TCQ1 289 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 CA5BP1Q8WTZ4 195 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 RNASE6Q93091 150 aaKnown RBP17.7■□□□□ 0.42
GPC1-202ENST00000420138 FAHD2AQ96GK7 314 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 BBC3Q96PG8 261 aaPredicted RBP17.7■□□□□ 0.42
GPC1-202ENST00000420138 DPCDQ9BVM2 203 aaPredicted RBP17.7■□□□□ 0.42
GPC1-202ENST00000420138 U3KQ87 197 aa17.7■□□□□ 0.42
GPC1-202ENST00000420138 A6NLC8 198 aa17.69■□□□□ 0.42
GPC1-202ENST00000420138 DEGS1O15121 323 aa17.69■□□□□ 0.42
GPC1-202ENST00000420138 OR2H2O95918 312 aa17.69■□□□□ 0.42
GPC1-202ENST00000420138 SSTR2P30874 369 aa17.69■□□□□ 0.42
GPC1-202ENST00000420138 NPY4RP50391 375 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms