RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 OR5D14Q8NGL3 314 aa12.85□□□□□ -0.35
SEMA4D-204ENST00000420101 DNPH1O43598 174 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 HIST1H2BKO60814 126 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 HIST1H2BJP06899 126 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 QDPRP09417 244 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 RD3LP0DJH9 198 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 NR2C1P13056 603 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 HIST1H2BOP23527 126 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 HIST1H2BBP33778 126 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 GUCA1AP43080 201 aaPredicted RBP12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 OR3A2P47893 321 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 CSNK1A1P48729 337 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 HIST1H2BDP58876 126 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 HIST1H2BCP62807 126 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 SLC10A1Q14973 349 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 HIST2H2BEQ16778 126 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 PCK2Q16822 640 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 SLC35E3Q7Z769 313 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 LINC00346Q8IVM7 164 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 ZNF101Q8IZC7 436 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 OR10G4Q8NGN3 311 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 HIST1H2BHQ93079 126 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 RCC1LQ96I51 464 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 ZNF385AQ96PM9 386 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 HIST1H2BNQ99877 126 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 HIST1H2BMQ99879 126 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 C20orf24Q9BUV8 137 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 MRPL13Q9BYD1 178 aaKnown RBP12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 NELFAQ9H3P2 528 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 GSKIPQ9P0R6 139 aa12.84□□□□□ -0.35
SEMA4D-204ENST00000420101 SMCO3A2RU48 225 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 TCAPO15273 167 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 GNB3P16520 340 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 NDUFB7P17568 137 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 NPY4RP50391 375 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 GAMTQ14353 236 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 IL13RA2Q14627 380 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 SGPP2Q8IWX5 399 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 SLC26A10Q8NG04 563 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 HPSE2Q8WWQ2 592 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 TVP23CQ96ET8 276 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 URM1Q9BTM9 101 aaKnown RBP12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 NDUFAF3Q9BU61 184 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 ACTR3CQ9C0K3 210 aaPredicted RBP12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 DEFB127Q9H1M4 99 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 PITPNC1Q9UKF7 332 aa12.83□□□□□ -0.35
SEMA4D-204ENST00000420101 TMEM269A0A1B0GVZ9 245 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 PRH1P02810 166 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 SFTPBP07988 381 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 TNFSF10P50591 281 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 NUTF2P61970 127 aaKnown RBP12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 LSM6P62312 80 aaKnown RBP12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 JOSD1Q15040 202 aaPredicted RBP12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 KHDC3LQ587J8 217 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 AKR1C8PQ5T2L2 129 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 C11orf40Q8WZ69 217 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 ZNF845Q96IR2 970 aaPredicted RBP12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 RHOVQ96L33 236 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 SF3B5Q9BWJ5 86 aaKnown RBP12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 PRRG4Q9BZD6 226 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 METTL9Q9H1A3 318 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 LPAR5Q9H1C0 372 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 CENPMQ9NSP4 180 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 KIAA1456Q9P272 454 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 CBY1Q9Y3M2 126 aa12.83□□□□□ -0.36
SEMA4D-204ENST00000420101 RIF1Q5UIP0 2472 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 H3BSH0 61 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 DLL1O00548 723 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 RRP8O43159 456 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 SYNGR4O95473 234 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 HSPB1P04792 205 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 CTSDP07339 412 aaPredicted RBP12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 AMY2BP19961 511 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 CDAP32320 146 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 TAGLN2P37802 199 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 ID4P47928 161 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 GLIPR1P48060 266 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 PNRC1Q12796 327 aaPredicted RBP12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 SLC22A6Q4U2R8 563 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 AADACL3Q5VUY0 350 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 MRPL52Q86TS9 123 aaKnown RBP12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 FAM219AQ8IW50 185 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 BHLHE23Q8NDY6 225 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 OR2AJ1Q8NGZ0 328 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 ST7LQ8TDW4 575 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 ADGRG7Q96K78 797 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 MOB1AQ9H8S9 216 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 EMC9Q9Y3B6 208 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 CFAP54Q96N23 3096 aa12.82□□□□□ -0.36
SEMA4D-204ENST00000420101 RBFOX3A6NFN3 312 aa12.81□□□□□ -0.36
SEMA4D-204ENST00000420101 A8MWP6 167 aa12.81□□□□□ -0.36
SEMA4D-204ENST00000420101 H3BQ15 152 aa12.81□□□□□ -0.36
SEMA4D-204ENST00000420101 LHX2P50458 406 aa12.81□□□□□ -0.36
SEMA4D-204ENST00000420101 UBE2KP61086 200 aa12.81□□□□□ -0.36
SEMA4D-204ENST00000420101 CLEC9AQ6UXN8 241 aa12.81□□□□□ -0.36
SEMA4D-204ENST00000420101 ZFP62Q8NB50 900 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-204ENST00000420101 OR13G1Q8NGZ3 307 aa12.81□□□□□ -0.36
SEMA4D-204ENST00000420101 CMBLQ96DG6 245 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms