RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 MRPS17Q9Y2R5 130 aaKnown RBP13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 TRBV23-1A0A0A0MS06 115 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 RPS23P62266 143 aaKnown RBP13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 PSG4Q00888 419 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 RUNX1Q01196 453 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 ZNF266Q14584 549 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 CEACAM16Q2WEN9 425 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 FAM209BQ5JX69 171 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 ZNF611Q8N823 705 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 LRTM2Q8N967 370 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 FGFBP3Q8TAT2 258 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 TUBA4BQ9H853 241 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 LIPGQ9Y5X9 500 aa13.11□□□□□ -0.31
SEMA3B-203ENST00000419007 K7N7A8 449 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 AP4M1O00189 453 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 ATXN7O15265 892 aaPredicted RBP13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 TNFSF12O43508 249 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 TRAPPC6AO75865 159 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 KIAA0141Q14154 515 aaPredicted RBP13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 C9orf135Q5VTT2 229 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 Q6ZPA2 131 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 TBC1D26Q86UD7 250 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 DOCK7Q96N67 2140 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 TCEAL7Q9BRU2 100 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 RBFOX3A6NFN3 312 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 ZNF724A8MTY0 619 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 ADAM20O43506 726 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 CXCL13O43927 109 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 YIF1AO95070 293 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 IFNA17P01571 189 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 FUT3P21217 361 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 TAGLN2P37802 199 aaKnown RBP13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 CARD18P57730 90 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 FOXL2NBQ6ZUU3 175 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 LFNGQ8NES3 379 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 DNASE2BQ8WZ79 361 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 NAT6Q93015 286 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 TMEM38BQ9NVV0 291 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 WRBO00258 174 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 HSD17B6O14756 317 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 F10P00742 488 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 KLK3P07288 261 aaPredicted RBP13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 EIF2S3P41091 472 aaKnown RBP13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 RAC1P63000 192 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 TSC22D1Q15714 1073 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 MRPL14Q6P1L8 145 aaKnown RBP13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 FAM180AQ6UWF9 173 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 DPPA2Q7Z7J5 298 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 RPS19BP1Q86WX3 136 aaKnown RBP13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 OR4D5Q8NGN0 318 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 PARPBPQ9NWS1 579 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 AHCTF1Q8WYP5 2266 aa13.1□□□□□ -0.31
SEMA3B-203ENST00000419007 ADAMTS20P59510 1910 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 FUT6P51993 359 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 UCP2P55851 309 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 RBM11P57052 281 aaKnown RBP13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 UBE2KP61086 200 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 ZNF343Q6P1L6 599 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 CCDC54Q8NEL0 328 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 TMEM171Q8WVE6 324 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 INTS12Q96CB8 462 aaKnown RBP13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 NTNG2Q96CW9 530 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 PROK2Q9HC23 129 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 FREM1Q5H8C1 2179 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 H0YL77 283 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 H3BP45 60 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 H3BQ15 152 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 HSPA12AO43301 675 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 EPHA1P21709 976 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 RPS18P62269 152 aaKnown RBP13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 ACER2Q5QJU3 275 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 EXTL1Q92935 676 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 FOXB1Q99853 325 aa13.09□□□□□ -0.31
SEMA3B-203ENST00000419007 TRDCB7Z8K6 153 aa13.08□□□□□ -0.31
SEMA3B-203ENST00000419007 JMJD7P0C870 316 aa13.08□□□□□ -0.31
SEMA3B-203ENST00000419007 DYNLT3P51808 116 aa13.08□□□□□ -0.31
SEMA3B-203ENST00000419007 NDUFA6P56556 154 aa13.08□□□□□ -0.31
SEMA3B-203ENST00000419007 RND3P61587 244 aa13.08□□□□□ -0.31
SEMA3B-203ENST00000419007 ZNF674Q2M3X9 581 aa13.08□□□□□ -0.31
SEMA3B-203ENST00000419007 SLC25A24Q6NUK1 477 aa13.08□□□□□ -0.31
SEMA3B-203ENST00000419007 GAPTQ8N292 157 aa13.08□□□□□ -0.31
SEMA3B-203ENST00000419007 TMEM252Q8N6L7 170 aa13.08□□□□□ -0.31
SEMA3B-203ENST00000419007 TMEM222Q9H0R3 208 aa13.08□□□□□ -0.31
SEMA3B-203ENST00000419007 FRYQ5TBA9 3013 aa13.08□□□□□ -0.31
SEMA3B-203ENST00000419007 IGHV1-45A0A0A0MS14 117 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 A0A0G2JMM0 328 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 A0A1W2PPB8 328 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 A0A1W2PRS3 328 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 KIR3DP1A8MWS1 328 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 ZNF587BE7ETH6 402 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 IGHV2-5P01817 119 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 TK1P04183 234 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 RAB39BQ96DA2 213 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 SEBOXQ9HB31 216 aaPredicted RBP13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 CST2P09228 141 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 SCTP09683 121 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 CCL2P13500 99 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 RAB1AP62820 205 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 Q6ZSR3 168 aa13.08□□□□□ -0.32
SEMA3B-203ENST00000419007 PLEKHF2Q9H8W4 249 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms