RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 TRIM77I1YAP6 450 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 MGPP08493 103 aa9.92□□□□□ -0.82
PTCH1-205ENST00000418258 A0A1B0GTL3 188 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 TRDCB7Z8K6 153 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 ZNF737O75373 536 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 HLXQ14774 488 aaPredicted RBP9.91□□□□□ -0.82
PTCH1-205ENST00000418258 C11orf87Q6NUJ2 197 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 ZNF429Q86V71 674 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 SLC25A40Q8TBP6 338 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 VSIG4Q9Y279 399 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 FANCMQ8IYD8 2048 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 CDIPTO14735 213 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 BCL2L11O43521 198 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 HOXC8P31273 242 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 RRN3P1Q2M238 152 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 C10orf90Q96M02 699 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 VPS25Q9BRG1 176 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 RNF7Q9UBF6 113 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 A0A1B0GTH9 108 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 G6PCP35575 357 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 SELENOPP49908 381 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 DOLPP1Q86YN1 238 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 SPICQ8N5J4 248 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 ZDHHC22Q8N966 263 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 Q8WTZ3 238 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 TMEM127O75204 238 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 CDKN2AP42771 156 aaKnown RBP9.91□□□□□ -0.82
PTCH1-205ENST00000418258 MOGAT1Q96PD6 335 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 OR2T8A6NH00 312 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 FABP4P15090 132 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 OR8I2Q8N0Y5 310 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 DPH3Q96FX2 82 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 ZNF154Q13106 437 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 RPEL1Q2QD12 228 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 VWA1Q6PCB0 445 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 ZNF768Q9H5H4 540 aaKnown RBP9.91□□□□□ -0.82
PTCH1-205ENST00000418258 CA10Q9NS85 328 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 ZNF275Q9NSD4 429 aaPredicted RBP9.91□□□□□ -0.82
PTCH1-205ENST00000418258 RNFT1Q5M7Z0 435 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 SLC35E4Q6ICL7 350 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 SMIM4Q8WVI0 70 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 VAMP8Q9BV40 100 aa9.91□□□□□ -0.82
PTCH1-205ENST00000418258 CTLA4P16410 223 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 CBLN3Q6UW01 205 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 THSD4Q6ZMP0 1018 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 NUP37Q8NFH4 326 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 COL18A1P39060 1754 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 KIAA1324LA8MWY0 1029 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-205ENST00000418258 CAMPP49913 170 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 TIAL1Q01085 375 aaKnown RBP eCLIP9.9□□□□□ -0.82
PTCH1-205ENST00000418258 EIF4E3Q8N5X7 224 aaKnown RBP9.9□□□□□ -0.82
PTCH1-205ENST00000418258 R3HDM4Q96D70 268 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 COX14Q96I36 57 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 DIRC2Q96SL1 478 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 RHNO1Q9BSD3 238 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 MRPL37Q9BZE1 423 aaKnown RBP9.9□□□□□ -0.82
PTCH1-205ENST00000418258 SLC17A5Q9NRA2 495 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 SLC25A10Q9UBX3 287 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-205ENST00000418258 IGLV3-16A0A075B6K0 115 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 ZFPL1O95159 310 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 RPS4Y1P22090 263 aaKnown RBP9.9□□□□□ -0.82
PTCH1-205ENST00000418258 ID1P41134 155 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 PSMB2P49721 201 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 ZNF547Q8IVP9 402 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 ZG16BQ96DA0 208 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 NAA60Q9H7X0 242 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 BRWD3Q6RI45 1802 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 A0A1W2PNV4 684 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 GP1BAP07359 652 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 CCL3P10147 92 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 FGF8P55075 233 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-205ENST00000418258 TINAGQ9UJW2 476 aa9.9□□□□□ -0.82
PTCH1-205ENST00000418258 SHANK3Q9BYB0 1731 aa9.9□□□□□ -0.83
PTCH1-205ENST00000418258 ADAM11O75078 769 aa9.9□□□□□ -0.83
PTCH1-205ENST00000418258 RD3LP0DJH9 198 aa9.9□□□□□ -0.83
PTCH1-205ENST00000418258 HIST1H3AP68431 136 aa9.9□□□□□ -0.83
PTCH1-205ENST00000418258 DUSP18Q8NEJ0 188 aa9.9□□□□□ -0.83
PTCH1-205ENST00000418258 FLYWCH2Q96CP2 140 aaKnown RBP9.9□□□□□ -0.83
PTCH1-205ENST00000418258 MSL2Q9HCI7 577 aa9.9□□□□□ -0.83
PTCH1-205ENST00000418258 ZFP36L2P47974 494 aaKnown RBP9.9□□□□□ -0.83
PTCH1-205ENST00000418258 HNRNPA3P51991 378 aaKnown RBP9.9□□□□□ -0.83
PTCH1-205ENST00000418258 C1orf185Q5T7R7 199 aa9.9□□□□□ -0.83
PTCH1-205ENST00000418258 TBC1D26Q86UD7 250 aa9.9□□□□□ -0.83
PTCH1-205ENST00000418258 ZNF596Q8TC21 504 aa9.9□□□□□ -0.83
PTCH1-205ENST00000418258 HARBI1Q96MB7 349 aa9.9□□□□□ -0.83
PTCH1-205ENST00000418258 RPS4XP62701 263 aaKnown RBP9.89□□□□□ -0.83
PTCH1-205ENST00000418258 UBE2L3P68036 154 aaKnown RBP9.89□□□□□ -0.83
PTCH1-205ENST00000418258 GPR27Q9NS67 375 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 DOCK8Q8NF50 2099 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 DIDO1Q9BTC0 2240 aaKnown RBP9.89□□□□□ -0.83
PTCH1-205ENST00000418258 TGOLN2O43493 480 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 ADRA2AP08913 450 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 PRR35P0CG20 571 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 DEGS2Q6QHC5 323 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 SH2D5Q6ZV89 423 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 PLPP2O43688 288 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 DYNLT3P51808 116 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 CADM3Q8N126 398 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 GMPPAQ96IJ6 420 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-205ENST00000418258 SMIM18P0DKX4 95 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms