RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 hADV38S2A0JD32 116 aa19■□□□□ 0.63
SMARCB1-205ENST00000417137 H3BUI4 141 aa19■□□□□ 0.63
SMARCB1-205ENST00000417137 SLC33A1O00400 549 aaPredicted RBP19■□□□□ 0.63
SMARCB1-205ENST00000417137 OR3A1P47881 315 aa19■□□□□ 0.63
SMARCB1-205ENST00000417137 MPV17LQ2QL34 196 aa19■□□□□ 0.63
SMARCB1-205ENST00000417137 VMO1Q7Z5L0 202 aa19■□□□□ 0.63
SMARCB1-205ENST00000417137 BPIFB2Q8N4F0 458 aa19■□□□□ 0.63
SMARCB1-205ENST00000417137 OR6M1Q8NGM8 313 aa19■□□□□ 0.63
SMARCB1-205ENST00000417137 MS4A7Q9GZW8 240 aaPredicted RBP19■□□□□ 0.63
SMARCB1-205ENST00000417137 OCEL1Q9H607 264 aa19■□□□□ 0.63
SMARCB1-205ENST00000417137 IFT22Q9H7X7 185 aa19■□□□□ 0.63
SMARCB1-205ENST00000417137 METTL8Q9H825 291 aaKnown RBP19■□□□□ 0.63
SMARCB1-205ENST00000417137 PLGRKTQ9HBL7 147 aa19■□□□□ 0.63
SMARCB1-205ENST00000417137 AK6Q9Y3D8 172 aaKnown RBP19■□□□□ 0.63
SMARCB1-205ENST00000417137 TRAV40A0A0B4J280 105 aa18.99■□□□□ 0.63
SMARCB1-205ENST00000417137 CRTAPO75718 401 aaPredicted RBP18.99■□□□□ 0.63
SMARCB1-205ENST00000417137 OR7C1O76099 320 aaPredicted RBP18.99■□□□□ 0.63
SMARCB1-205ENST00000417137 CSN2P05814 226 aa18.99■□□□□ 0.63
SMARCB1-205ENST00000417137 FGF9P31371 208 aaPredicted RBP18.99■□□□□ 0.63
SMARCB1-205ENST00000417137 PAN3Q58A45 887 aaKnown RBP18.99■□□□□ 0.63
SMARCB1-205ENST00000417137 C22orf42Q6IC83 251 aa18.99■□□□□ 0.63
SMARCB1-205ENST00000417137 PPA2Q9H2U2 334 aa18.99■□□□□ 0.63
SMARCB1-205ENST00000417137 V9GY05 133 aa18.99■□□□□ 0.63
SMARCB1-205ENST00000417137 GEMIN2O14893 280 aaKnown RBP18.98■□□□□ 0.63
SMARCB1-205ENST00000417137 SLC22A1O15245 554 aa18.98■□□□□ 0.63
SMARCB1-205ENST00000417137 IGHV4-38-2P0DP08 117 aa18.98■□□□□ 0.63
SMARCB1-205ENST00000417137 MGMTP16455 207 aa18.98■□□□□ 0.63
SMARCB1-205ENST00000417137 KCNJ3P48549 501 aa18.98■□□□□ 0.63
SMARCB1-205ENST00000417137 P2RX3P56373 397 aa18.98■□□□□ 0.63
SMARCB1-205ENST00000417137 Q8N7P7 452 aa18.98■□□□□ 0.63
SMARCB1-205ENST00000417137 ZNF418Q8TF45 676 aaPredicted RBP18.98■□□□□ 0.63
SMARCB1-205ENST00000417137 LHX4Q969G2 390 aa18.98■□□□□ 0.63
SMARCB1-205ENST00000417137 C1orf147Q96MC9 270 aaPredicted RBP18.98■□□□□ 0.63
SMARCB1-205ENST00000417137 BARHL1Q9BZE3 327 aa18.98■□□□□ 0.63
SMARCB1-205ENST00000417137 SPACA1Q9HBV2 294 aa18.98■□□□□ 0.63
SMARCB1-205ENST00000417137 ANK3Q12955 4377 aaKnown RBP18.98■□□□□ 0.63
SMARCB1-205ENST00000417137 IGHV3OR16-10A0A075B7F0 116 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 TRAV24A0A0B4J272 114 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 A0A1W2PP11 408 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A10PA6NDY2 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A18PA6NE21 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A16PA6NEW6 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A20PA6NIJ5 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A8PA6NJQ4 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A7PA6NKC0 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A22PA8MWA6 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A12PA8MX19 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A5PA8MXJ8 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A23PA8MXZ1 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 SLC17A2O00624 439 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A15PP0C7V4 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A13PP0C7W8 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A14PP0C7W9 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 FAM90A24PP0C7X0 464 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 CD36P16671 472 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 PRTN3P24158 256 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 GUCA2AQ02747 115 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 RAB11BQ15907 218 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 TAF9Q16594 264 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 KRBOX4Q5JUW0 171 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 NCR3LG1Q68D85 454 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 METAP1DQ6UB28 335 aaPredicted RBP18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 PRIMA1Q86XR5 153 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 KCNG3Q8TAE7 436 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 SUCNR1Q9BXA5 334 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 SELENOIQ9C0D9 397 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 BANF2Q9H503 90 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 UNKLQ9H9P5 680 aaKnown RBP18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 TXNL4BQ9NX01 149 aaKnown RBP18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 LINC00312Q9Y6C7 94 aa18.97■□□□□ 0.63
SMARCB1-205ENST00000417137 CENPVL3A0A0U1RRI6 287 aa18.96■□□□□ 0.63
SMARCB1-205ENST00000417137 BPNT1O95861 308 aa18.96■□□□□ 0.63
SMARCB1-205ENST00000417137 ZNF728P0DKX0 622 aa18.96■□□□□ 0.63
SMARCB1-205ENST00000417137 AESQ08117 197 aa18.96■□□□□ 0.63
SMARCB1-205ENST00000417137 ZNF273Q14593 569 aa18.96■□□□□ 0.63
SMARCB1-205ENST00000417137 ATAD3CQ5T2N8 411 aa18.96■□□□□ 0.63
SMARCB1-205ENST00000417137 TPRX1Q8N7U7 411 aa18.96■□□□□ 0.63
SMARCB1-205ENST00000417137 GFI1Q99684 422 aa18.96■□□□□ 0.63
SMARCB1-205ENST00000417137 DPCDQ9BVM2 203 aaPredicted RBP18.96■□□□□ 0.63
SMARCB1-205ENST00000417137 SIRT7Q9NRC8 400 aa18.96■□□□□ 0.63
SMARCB1-205ENST00000417137 ZNF69Q9UC07 566 aa18.96■□□□□ 0.63
SMARCB1-205ENST00000417137 JMJD1CQ15652 2540 aa18.96■□□□□ 0.63
SMARCB1-205ENST00000417137 TRGV10A0A0A0MS01 117 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 A0A0A6YYJ9 748 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 TRIM64CA6NLI5 447 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 HSPB6O14558 160 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 ARSBP15848 533 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 JUNBP17275 347 aaPredicted RBP18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 RAB3BP20337 219 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 ATXN7L3Q14CW9 347 aaPredicted RBP18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 TIMM50Q3ZCQ8 353 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 RBMS3Q6XE24 437 aaKnown RBP18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 C9orf139Q6ZV77 190 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 TRAPPC6BQ86SZ2 158 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 SUMF2Q8NBJ7 301 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 TMEM104Q8NE00 496 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 ZNF714Q96N38 554 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 OR51E2Q9H255 320 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 NCOR1P1Q9H4R4 102 aa18.95■□□□□ 0.62
SMARCB1-205ENST00000417137 HEXA-AS1Q9H8Q6 139 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms