RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 A6NCN8 305 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 C17orf105B2RV13 164 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 PPP5D1E7EU14 171 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 TNFSF14O43557 240 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 TCF21O43680 179 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 EPHA1P21709 976 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 DYNLT3P51808 116 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 MRPS34P82930 218 aaKnown RBP12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 TLE4Q04727 773 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 PRSS8Q16651 343 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 PRTGQ2VWP7 1150 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 SHISA6Q6ZSJ9 500 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 PRR18Q8N4B5 295 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 DIRC2Q96SL1 478 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 CDH20Q9HBT6 801 aa12.82□□□□□ -0.36
NCKIPSD-204ENST00000416649 ZNF43P17038 809 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 DCAF10Q5QP82 559 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 FAM90A2PQ658T7 463 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 C16orf47Q6ZP98 133 aaPredicted RBP12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 FAM57BQ71RH2 274 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 DYRK2Q92630 601 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 LRRC61Q9BV99 259 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 TBL1XR1Q9BZK7 514 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 ZNF319Q9P2F9 582 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 PI4KAP42356 2102 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 TRBV24-1A0A075B6N3 115 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 TOX3O15405 576 aaPredicted RBP12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 CD33P20138 364 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 RND2P52198 227 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 OR5I1Q13606 314 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 RTL6Q6ICC9 239 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 ZNF774Q6NX45 483 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 LIAT1Q6ZQX7 453 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 ELOVL1Q9BW60 279 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 FKBP11Q9NYL4 201 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 V9GYS6 101 aa12.81□□□□□ -0.36
NCKIPSD-204ENST00000416649 NKX2-6A6NCS4 301 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 CEBPZOSA8MTT3 80 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 METTL15P1P0C7V9 234 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 IRF2P14316 349 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 HSD17B7P56937 341 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 ZNF121P58317 390 aaPredicted RBP12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 KISS1Q15726 138 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 C20orf196Q8IYI0 205 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 OR8B12Q8NGG6 310 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 OR10S1Q8NGN2 331 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 THAP3Q8WTV1 239 aaPredicted RBP12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 HLA-CQ95604 372 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 PIGTQ969N2 578 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 RBMXL1Q96E39 390 aaKnown RBP12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 PCGF1Q9BSM1 259 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 SRD5A3Q9H8P0 318 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 SLC2A9Q9NRM0 540 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 KIAA2026Q5HYC2 2103 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 IGHV1OR15-9A0A0B4J2B8 117 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 A0A1W2PPC4 97 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 H3BP45 60 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 DXOO77932 396 aaKnown RBP12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 MT-ATP6P00846 226 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 IL12BP29460 328 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 CDAP32320 146 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 NKX2-1P43699 371 aaPredicted RBP12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 TFPI2P48307 235 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 GNB2P62879 340 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 OR5T1Q8NG75 326 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 TWSG1Q9GZX9 223 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 ANXA10Q9UJ72 324 aa12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 MAP1BP46821 2468 aaKnown RBP12.8□□□□□ -0.36
NCKIPSD-204ENST00000416649 IGKV1-9A0A0C4DH69 117 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 LOC102723971A0A1B0GUV8 181 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 FCGR2AP12318 317 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 ZNF154Q13106 437 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 HNF4GQ14541 408 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 RAB35Q15286 201 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 DEGS2Q6QHC5 323 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 SYT13Q7L8C5 426 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 C16orf82Q7Z2V1 217 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 SLC38A9Q8NBW4 561 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 MMABQ96EY8 250 aaPredicted RBP12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 GPHA2Q96T91 129 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 GLRX2Q9NS18 164 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 POLR3KQ9Y2Y1 108 aaPredicted RBP12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 CACNA1EQ15878 2313 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 CA11O75493 328 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 HBE1P02100 147 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 GUSBP08236 651 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 SELEP16581 610 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 FAM189A2Q15884 450 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 CST9LP1Q5W188 147 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 ARMC6Q6NXE6 501 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 NUP54Q7Z3B4 507 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 OOSP2Q86WS3 158 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 TMEM252Q8N6L7 170 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 IL22RA1Q8N6P7 574 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 SDSLQ96GA7 329 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 ZNF581Q9P0T4 197 aa12.79□□□□□ -0.36
NCKIPSD-204ENST00000416649 SERPINE3A8MV23 424 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 YPEL5P62699 121 aa12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 PNRC1Q12796 327 aaPredicted RBP12.78□□□□□ -0.36
NCKIPSD-204ENST00000416649 RTP5Q14D33 572 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms