RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 F2RL2O00254 374 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 WBP4O75554 376 aaKnown RBP20.15■□□□□ 0.82
HLA-C-204ENST00000415537 MMP23AO75900 390 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 CSN2P05814 226 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 CD2P06729 351 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 LIMS3P0CW19 117 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 LIMS4P0CW20 117 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 VSIG10L2P0DP72 767 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 CDK2P24941 298 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 DCKP27707 260 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 HTR1DP28221 377 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 SOX2P48431 317 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 MTNR1BP49286 362 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 DYNLT3P51808 116 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 IL18R1Q13478 541 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 CCDC58Q4VC31 144 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 KRBOX4Q5JUW0 171 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 RPL22L1Q6P5R6 122 aaKnown RBP20.15■□□□□ 0.82
HLA-C-204ENST00000415537 CCBE1Q6UXH8 406 aaPredicted RBP20.15■□□□□ 0.82
HLA-C-204ENST00000415537 ABHD12Q8N2K0 398 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 GPR148Q8TDV2 347 aa20.15■□□□□ 0.82
HLA-C-204ENST00000415537 SLC33A1O00400 549 aaPredicted RBP20.14■□□□□ 0.81
HLA-C-204ENST00000415537 PRAMEF5Q5TYX0 476 aa20.14■□□□□ 0.81
HLA-C-204ENST00000415537 Q6P435 159 aa20.14■□□□□ 0.81
HLA-C-204ENST00000415537 HEPN1Q6WQI6 88 aa20.14■□□□□ 0.81
HLA-C-204ENST00000415537 RTN4RL2Q86UN3 420 aa20.14■□□□□ 0.81
HLA-C-204ENST00000415537 ZNF596Q8TC21 504 aa20.14■□□□□ 0.81
HLA-C-204ENST00000415537 NR1H4Q96RI1 486 aaPredicted RBP20.14■□□□□ 0.81
HLA-C-204ENST00000415537 ODAMA1E959 279 aa20.13■□□□□ 0.81
HLA-C-204ENST00000415537 PTGFRP43088 359 aa20.13■□□□□ 0.81
HLA-C-204ENST00000415537 ETV1P50549 477 aa20.13■□□□□ 0.81
HLA-C-204ENST00000415537 ATXN7L3Q14CW9 347 aaPredicted RBP20.13■□□□□ 0.81
HLA-C-204ENST00000415537 LRRC36Q1X8D7 754 aa20.13■□□□□ 0.81
HLA-C-204ENST00000415537 ARSJQ5FYB0 599 aaPredicted RBP20.13■□□□□ 0.81
HLA-C-204ENST00000415537 C11orf44Q8N8P7 122 aa20.13■□□□□ 0.81
HLA-C-204ENST00000415537 PXT1Q8NFP0 134 aa20.13■□□□□ 0.81
HLA-C-204ENST00000415537 OR4D6Q8NGJ1 314 aa20.13■□□□□ 0.81
HLA-C-204ENST00000415537 CNIH3Q8TBE1 160 aa20.13■□□□□ 0.81
HLA-C-204ENST00000415537 CYGBQ8WWM9 190 aa20.13■□□□□ 0.81
HLA-C-204ENST00000415537 PRSS22Q9GZN4 317 aa20.13■□□□□ 0.81
HLA-C-204ENST00000415537 FAM192AQ9GZU8 254 aa20.13■□□□□ 0.81
HLA-C-204ENST00000415537 H0YJX3 145 aa20.12■□□□□ 0.81
HLA-C-204ENST00000415537 CLIC3O95833 236 aa20.12■□□□□ 0.81
HLA-C-204ENST00000415537 MYL12AP19105 171 aa20.12■□□□□ 0.81
HLA-C-204ENST00000415537 CDK5R1Q15078 307 aa20.12■□□□□ 0.81
HLA-C-204ENST00000415537 RSU1Q15404 277 aa20.12■□□□□ 0.81
HLA-C-204ENST00000415537 TTC23Q5W5X9 447 aa20.12■□□□□ 0.81
HLA-C-204ENST00000415537 ELP2Q6IA86 826 aa20.12■□□□□ 0.81
HLA-C-204ENST00000415537 TNFAIP8L1Q8WVP5 186 aa20.12■□□□□ 0.81
HLA-C-204ENST00000415537 ZNF702PQ9H963 129 aa20.12■□□□□ 0.81
HLA-C-204ENST00000415537 TAS2R4Q9NYW5 299 aa20.12■□□□□ 0.81
HLA-C-204ENST00000415537 CMYA5Q8N3K9 4069 aa20.12■□□□□ 0.81
HLA-C-204ENST00000415537 MEGF11A6BM72 1044 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 PEX14O75381 377 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 ARHGDIBP52566 201 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 MED21Q13503 144 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 OR2G6Q5TZ20 316 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 XAF1Q6GPH4 301 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 SETD9Q8NE22 299 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 OR51A2Q8NGJ7 313 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 OR4P4Q8NGL7 312 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 TMEM106AQ96A25 262 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 COQ2Q96H96 371 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 C8orf4Q9NR00 106 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 CHCHD3Q9NX63 227 aaKnown RBP20.11■□□□□ 0.81
HLA-C-204ENST00000415537 OR6C3Q9NZP0 311 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 DPM3Q9P2X0 92 aa20.11■□□□□ 0.81
HLA-C-204ENST00000415537 EXOSC1Q9Y3B2 195 aaKnown RBP20.11■□□□□ 0.81
HLA-C-204ENST00000415537 FAM172BPA6NC97 362 aa20.1■□□□□ 0.81
HLA-C-204ENST00000415537 ZNF729A6NN14 1252 aaPredicted RBP20.1■□□□□ 0.81
HLA-C-204ENST00000415537 GABRPO00591 440 aa20.1■□□□□ 0.81
HLA-C-204ENST00000415537 HSPB6O14558 160 aa20.1■□□□□ 0.81
HLA-C-204ENST00000415537 TOR1AO14656 332 aa20.1■□□□□ 0.81
HLA-C-204ENST00000415537 JUNBP17275 347 aaPredicted RBP20.1■□□□□ 0.81
HLA-C-204ENST00000415537 BDH1Q02338 343 aa20.1■□□□□ 0.81
HLA-C-204ENST00000415537 HABP2Q14520 560 aaPredicted RBP20.1■□□□□ 0.81
HLA-C-204ENST00000415537 PDLIM3Q53GG5 364 aaPredicted RBP20.1■□□□□ 0.81
HLA-C-204ENST00000415537 PAN3Q58A45 887 aaKnown RBP20.1■□□□□ 0.81
HLA-C-204ENST00000415537 ZNF529Q6P280 563 aa20.1■□□□□ 0.81
HLA-C-204ENST00000415537 BAIAP2L2Q6UXY1 529 aa20.1■□□□□ 0.81
HLA-C-204ENST00000415537 Q8N2B8 174 aa20.1■□□□□ 0.81
HLA-C-204ENST00000415537 CFHR4Q92496 578 aa20.1■□□□□ 0.81
HLA-C-204ENST00000415537 RGP1Q92546 391 aaPredicted RBP20.1■□□□□ 0.81
HLA-C-204ENST00000415537 BABAM2Q9NXR7 383 aa20.1■□□□□ 0.81
HLA-C-204ENST00000415537 LEUTXA8MZ59 168 aa20.09■□□□□ 0.81
HLA-C-204ENST00000415537 BRS3P32247 399 aa20.09■□□□□ 0.81
HLA-C-204ENST00000415537 PRRX1P54821 245 aa20.09■□□□□ 0.81
HLA-C-204ENST00000415537 PPP3R1P63098 170 aa20.09■□□□□ 0.81
HLA-C-204ENST00000415537 ZNF565Q8N9K5 539 aa20.09■□□□□ 0.81
HLA-C-204ENST00000415537 CREB3L1Q96BA8 519 aa20.09■□□□□ 0.81
HLA-C-204ENST00000415537 BARHL1Q9BZE3 327 aa20.09■□□□□ 0.81
HLA-C-204ENST00000415537 PPIL3Q9H2H8 161 aaKnown RBP20.09■□□□□ 0.81
HLA-C-204ENST00000415537 SERTAD4Q9NUC0 356 aa20.09■□□□□ 0.81
HLA-C-204ENST00000415537 DIMT1Q9UNQ2 313 aaKnown RBP20.09■□□□□ 0.81
HLA-C-204ENST00000415537 ZNF281Q9Y2X9 895 aa20.09■□□□□ 0.81
HLA-C-204ENST00000415537 VWFP04275 2813 aa20.09■□□□□ 0.81
HLA-C-204ENST00000415537 HTR3BO95264 441 aa20.08■□□□□ 0.81
HLA-C-204ENST00000415537 ALDOBP05062 364 aa20.08■□□□□ 0.81
HLA-C-204ENST00000415537 CD34P28906 385 aa20.08■□□□□ 0.81
HLA-C-204ENST00000415537 CEACAM3P40198 252 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms