RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 TMEM88Q6PEY1 159 aa9.97□□□□□ -0.81
RFFL-205ENST00000415395 UNQ6494/PRO21346Q6UXR6 183 aa9.97□□□□□ -0.81
RFFL-205ENST00000415395 C17orf78Q8N4C9 275 aa9.97□□□□□ -0.81
RFFL-205ENST00000415395 C15orf54Q8N8G6 183 aa9.97□□□□□ -0.81
RFFL-205ENST00000415395 CPEB3Q8NE35 698 aaKnown RBP9.97□□□□□ -0.81
RFFL-205ENST00000415395 PECRQ9BY49 303 aa9.97□□□□□ -0.81
RFFL-205ENST00000415395 CNTNAP3Q9BZ76 1288 aa9.97□□□□□ -0.81
RFFL-205ENST00000415395 TLNRD1Q9H1K6 362 aa9.97□□□□□ -0.81
RFFL-205ENST00000415395 OPA3Q9H6K4 179 aa9.97□□□□□ -0.81
RFFL-205ENST00000415395 FAM212BQ9NTI7 297 aaPredicted RBP9.97□□□□□ -0.81
RFFL-205ENST00000415395 OR5AC2Q9NZP5 309 aa9.97□□□□□ -0.81
RFFL-205ENST00000415395 LUZP4Q9P127 313 aa9.97□□□□□ -0.81
RFFL-205ENST00000415395 PROCRQ9UNN8 238 aa9.97□□□□□ -0.81
RFFL-205ENST00000415395 KCNIP3Q9Y2W7 256 aa9.97□□□□□ -0.81
RFFL-205ENST00000415395 FAM215AQ9Y5M1 114 aa9.97□□□□□ -0.81
RFFL-205ENST00000415395 TMEM8BA6NDV4 472 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 E9PLN8 166 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 J3QW42 95 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 PRRG2O14669 202 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 SIGLEC5O15389 551 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 CGAP01215 116 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 SERPINA5P05154 406 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 SFTPBP07988 381 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 FAM87AP0C7U9 286 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 NAT2P11245 290 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 RPL12P30050 165 aaKnown RBP9.96□□□□□ -0.81
RFFL-205ENST00000415395 AKR1C2P52895 323 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 TMEM50BP56557 158 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 SUPT4H1P63272 117 aaKnown RBP9.96□□□□□ -0.81
RFFL-205ENST00000415395 FAM3AP98173 230 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 HGFACQ04756 655 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 AKR1C1Q04828 323 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 P2RY6Q15077 328 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 KISS1Q15726 138 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 IAH1Q2TAA2 248 aaPredicted RBP9.96□□□□□ -0.81
RFFL-205ENST00000415395 SNAI3Q3KNW1 292 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 VWA1Q6PCB0 445 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 BEND4Q6ZU67 534 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 SEM1Q6ZVN7 128 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 CBLN2Q8IUK8 224 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 OR4A4PQ8NGN8 299 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 SSC4DQ8WTU2 575 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 GLYATL2Q8WU03 294 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 SPSB4Q96A44 273 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 SGK3Q96BR1 496 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 REEP6Q96HR9 211 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 SFXN3Q9BWM7 321 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 IFT22Q9H7X7 185 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 OBP2BQ9NPH6 170 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 GSKIPQ9P0R6 139 aa9.96□□□□□ -0.81
RFFL-205ENST00000415395 SVILO95425 2214 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 INTS1Q8N201 2190 aaKnown RBP9.96□□□□□ -0.82
RFFL-205ENST00000415395 ZNHIT1O43257 154 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 HOXB5P09067 269 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 SFTA3P0C7M3 94 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 CEACAM8P31997 349 aaPredicted RBP9.96□□□□□ -0.82
RFFL-205ENST00000415395 APLNRP35414 380 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 RAB5CP51148 216 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 UBE2NP61088 152 aaKnown RBP9.96□□□□□ -0.82
RFFL-205ENST00000415395 CTAG1AP78358 180 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 IL15RAQ13261 267 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 GABRA6Q16445 453 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 MST1LQ2TV78 715 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 AADACL3Q5VUY0 350 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 CISD2Q8N5K1 135 aaKnown RBP9.96□□□□□ -0.82
RFFL-205ENST00000415395 SEMA6DQ8NFY4 1073 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 ZCCHC14Q8WYQ9 949 aaKnown RBP9.96□□□□□ -0.82
RFFL-205ENST00000415395 APOBEC3DQ96AK3 386 aaPredicted RBP9.96□□□□□ -0.82
RFFL-205ENST00000415395 STARD4Q96DR4 205 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 FAM122AQ96E09 287 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 POM121L2Q96KW2 1035 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 SPACA5Q96QH8 159 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 SULT4A1Q9BR01 284 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 CHST5Q9GZS9 411 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 ZNF835Q9Y2P0 537 aa9.96□□□□□ -0.82
RFFL-205ENST00000415395 PRRC2CQ9Y520 2896 aaKnown RBP9.95□□□□□ -0.82
RFFL-205ENST00000415395 ZNF503-AS2A6NEH8 195 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 MSGN1A6NI15 193 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 PCP4L1A6NKN8 68 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 FOXI3A8MTJ6 420 aaPredicted RBP9.95□□□□□ -0.82
RFFL-205ENST00000415395 C1orf196B1AJZ1 125 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 C1QTNF9BB2RNN3 333 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 E5RGE8 158 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 RAD51DO75771 328 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 HTR3BO95264 441 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 S100A8P05109 93 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 C1QTNF9P0C862 333 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 HKR1P10072 659 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 MUC1P15941 1255 aaPredicted RBP9.95□□□□□ -0.82
RFFL-205ENST00000415395 ANOS1P23352 680 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 HOXC12P31275 282 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 RPL35P42766 123 aaKnown RBP9.95□□□□□ -0.82
RFFL-205ENST00000415395 RBPJQ06330 500 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 FOXF2Q12947 444 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 HIKESHIQ53FT3 197 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 BTNL8Q6UX41 500 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 DMBX1Q8NFW5 382 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 OR10C1Q96KK4 312 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 C12orf57Q99622 126 aa9.95□□□□□ -0.82
RFFL-205ENST00000415395 TCEAL7Q9BRU2 100 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms