RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 RFPL4AA6NLU0 287 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 RFPL4AL1F8VTS6 287 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 GPR31O00270 319 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 TMEM127O75204 238 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 GLAP06280 429 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 FABP1P07148 127 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 ERCC1P07992 297 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-202ENST00000414700 OR4A8P0C604 315 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 SMIM6P0DI80 62 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 HTR2CP28335 458 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 RBMXP38159 391 aaKnown RBP13.2□□□□□ -0.3
SHMT2-202ENST00000414700 MTCP1P56278 107 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 RPS23P62266 143 aaKnown RBP13.2□□□□□ -0.3
SHMT2-202ENST00000414700 C1orf100Q5SVJ3 147 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 TMEM88Q6PEY1 159 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 ANGPTL5Q86XS5 388 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 CALHM1Q8IU99 346 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 TMEM185AQ8NFB2 350 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 C15orf40Q8WUR7 153 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 OR5P3Q8WZ94 311 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 SPSB1Q96BD6 273 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 BORCS8Q96FH0 119 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 GPER1Q99527 375 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 ADAT1Q9BUB4 502 aaKnown RBP13.2□□□□□ -0.3
SHMT2-202ENST00000414700 OR5V1Q9UGF6 321 aa13.2□□□□□ -0.3
SHMT2-202ENST00000414700 DOPEY2Q9Y3R5 2298 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 A0A0D9SG52 128 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 A0A1W2PPR1 153 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 FAUP35544 74 aaKnown RBP13.19□□□□□ -0.3
SHMT2-202ENST00000414700 MNDAP41218 407 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 RBP2P50120 134 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 RBMS2Q15434 407 aaKnown RBP13.19□□□□□ -0.3
SHMT2-202ENST00000414700 FAM74A1Q5RGS3 127 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 DCAF12L2Q5VW00 463 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 OR10K2Q6IF99 312 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 WDR86Q86TI4 376 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 SPAG16Q8N0X2 631 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 GLYATL2Q8WU03 294 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 PDCD10Q9BUL8 212 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 MPC1Q9Y5U8 109 aa13.19□□□□□ -0.3
SHMT2-202ENST00000414700 TMEM218A2RU14 115 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 ZNF732B4DXR9 585 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 SPRY1O43609 319 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-202ENST00000414700 CFPP27918 469 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 HAAOP46952 286 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 FUT6P51993 359 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 RAB11BQ15907 218 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 TMEM69Q5SWH9 247 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 S100A16Q96FQ6 103 aaKnown RBP13.18□□□□□ -0.3
SHMT2-202ENST00000414700 C1orf147Q96MC9 270 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-202ENST00000414700 TMEM204Q9BSN7 226 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 TMEM100Q9NV29 134 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 TAAR3PQ9P1P4 343 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 MBD2Q9UBB5 411 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 SLC7A11Q9UPY5 501 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 NBPF19A0A087WUL8 3843 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 LOC100289279A0A1B0GTE1 492 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 ANGPTL7O43827 346 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 EIF3GO75821 320 aaKnown RBP eCLIP13.18□□□□□ -0.3
SHMT2-202ENST00000414700 ALDH3B1P43353 468 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 POU3F4P49335 361 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 AVPI1Q5T686 147 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 AWAT2Q6E213 333 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 MEX3BQ6ZN04 569 aaKnown RBP13.18□□□□□ -0.3
SHMT2-202ENST00000414700 CBLN2Q8IUK8 224 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 OR8S1Q8NH09 359 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 NANPQ8TBE9 248 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 RAB40AQ8WXH6 277 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 FAM3DQ96BQ1 224 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 FOXRED1Q96CU9 486 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-202ENST00000414700 PHYHIPLQ96FC7 376 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 ZNF251Q9BRH9 671 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 PLK3Q9H4B4 646 aa13.18□□□□□ -0.3
SHMT2-202ENST00000414700 CISD1Q9NZ45 108 aaKnown RBP13.18□□□□□ -0.3
SHMT2-202ENST00000414700 TRAV20A0A0B4J274 112 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 A0A1W2PP11 408 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 A1L4Q6 167 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 C3orf80F5H4A9 247 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 ACAA1P09110 424 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-202ENST00000414700 SPP1P10451 314 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 PTGFRP43088 359 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 EFNB2P52799 333 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 OR8G1Q15617 311 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 C2orf76Q3KRA6 126 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 SPRNQ5BIV9 151 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 LHFPL2Q6ZUX7 228 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 BATF2Q8N1L9 274 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 ZCCHC24Q8N2G6 241 aaKnown RBP13.17□□□□□ -0.3
SHMT2-202ENST00000414700 MUC20Q8N307 709 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-202ENST00000414700 TNFAIP8L1Q8WVP5 186 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 TECTBQ96PL2 329 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 MRI1Q9BV20 369 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 MRPS28Q9Y2Q9 187 aaKnown RBP13.17□□□□□ -0.3
SHMT2-202ENST00000414700 CSMD2Q7Z408 3487 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 KANTRA0A1W2PQU2 76 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 SULT1C2O00338 296 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 CLDN1O95832 211 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 S100A8P05109 93 aa13.17□□□□□ -0.3
SHMT2-202ENST00000414700 SERPINF1P36955 418 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms