RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 PTBP3O95758 552 aaKnown RBP4.03□□□□□ -1.76
VPS41-205ENST00000414632 FADS2O95864 444 aaKnown RBP4.03□□□□□ -1.76
VPS41-205ENST00000414632 LHBP01229 141 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 WNT2P09544 360 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 FAM157CP0CG43 387 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 UBCP0CG48 685 aaKnown RBP4.03□□□□□ -1.76
VPS41-205ENST00000414632 LIMS3P0CW19 117 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 LIMS4P0CW20 117 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 CALCBP10092 127 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 HNF1AP20823 631 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 GLRA1P23415 457 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 HAAOP46952 286 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 GABRA2P47869 451 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 CEBPDP49716 269 aaPredicted RBP4.03□□□□□ -1.76
VPS41-205ENST00000414632 SNU13P55769 128 aaKnown RBP4.03□□□□□ -1.76
VPS41-205ENST00000414632 ACTA2P62736 377 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 GNG3P63215 75 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 ACTG2P63267 376 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 PRB3Q04118 309 aaPredicted RBP4.03□□□□□ -1.76
VPS41-205ENST00000414632 MZT1Q08AG7 82 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 RAB40BQ12829 278 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 UBE2V2Q15819 145 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 SNCBQ16143 134 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 ZNF181Q2M3W8 571 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 C2orf68Q2NKX9 166 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 CEACAM21Q3KPI0 293 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 KLHL22Q53GT1 634 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 CLVS2Q5SYC1 327 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 OR2G6Q5TZ20 316 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 TTC23Q5W5X9 447 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 XAF1Q6GPH4 301 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 LAIR2Q6ISS4 152 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 AHSA2Q719I0 299 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 ANGPTL5Q86XS5 388 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 CALHM1Q8IU99 346 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 C8orf59Q8N0T1 100 aaPredicted RBP4.03□□□□□ -1.76
VPS41-205ENST00000414632 OR8H3Q8N146 312 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 FAM216BQ8N7L0 139 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 ZNF676Q8N7Q3 588 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 ZFP41Q8N8Y5 198 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 BPIFB6Q8NFQ5 453 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 OR4M2Q8NGB6 313 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 OR13C3Q8NGS6 347 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 OR13C5Q8NGS8 318 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 TSEN15Q8WW01 171 aaKnown RBP4.03□□□□□ -1.76
VPS41-205ENST00000414632 GGHQ92820 318 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 ERGIC1Q969X5 290 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 RFT1Q96AA3 541 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 FGGYQ96C11 551 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 ORAI1Q96D31 301 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 ADAT3Q96EY9 351 aaPredicted RBP4.03□□□□□ -1.76
VPS41-205ENST00000414632 RRNAD1Q96FB5 475 aaKnown RBP4.03□□□□□ -1.76
VPS41-205ENST00000414632 HARBI1Q96MB7 349 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 SPACA5Q96QH8 159 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 PDCD1LG2Q9BQ51 273 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 FAM110AQ9BQ89 295 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 ZNF649Q9BS31 505 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 ZNF747Q9BV97 191 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 OR51I2Q9H344 312 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 RNPEPL1Q9HAU8 725 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 ELL3Q9HB65 397 aaPredicted RBP4.03□□□□□ -1.76
VPS41-205ENST00000414632 FGF20Q9NP95 211 aaPredicted RBP4.03□□□□□ -1.76
VPS41-205ENST00000414632 CLN8Q9UBY8 286 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 MIOXQ9UGB7 285 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 OR5V1Q9UGF6 321 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 ZNF391Q9UJN7 358 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 PCDHGB1Q9Y5G3 927 aa4.03□□□□□ -1.76
VPS41-205ENST00000414632 SOX21Q9Y651 276 aaPredicted RBP4.03□□□□□ -1.76
VPS41-205ENST00000414632 ATRQ13535 2644 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 IGKV1-27A0A075B6S5 117 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 TRAV38-1A0A0B4J264 116 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 IGKV1-9A0A0C4DH69 117 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 TRBV2A0A0J9YWF9 115 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 PQLC2LA1A4F0 135 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 MEX3AA1L020 520 aaKnown RBP4.02□□□□□ -1.77
VPS41-205ENST00000414632 OR5B21A6NL26 309 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 OR4C45A6NMZ5 311 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 A8MXK9 166 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 SRRM5B3KS81 715 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 F8VVB4 439 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 F8VWA3 439 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 H0YAE9 185 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 DVL1O14640 695 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 OGG1O15527 345 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 SPRY1O43609 319 aaPredicted RBP4.02□□□□□ -1.77
VPS41-205ENST00000414632 ATP6V1G2O95670 118 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 LALBAP00709 142 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 ATP6V1B1P15313 513 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 MYL12AP19105 171 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 CCL1P22362 96 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 AZGP1P25311 298 aaKnown RBP4.02□□□□□ -1.77
VPS41-205ENST00000414632 POU3F4P49335 361 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 GBX2P52951 348 aaPredicted RBP4.02□□□□□ -1.77
VPS41-205ENST00000414632 DLX1P56177 255 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 ST3GAL4Q11206 333 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 IL18R1Q13478 541 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 DGUOKQ16854 277 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 MICBQ29980 383 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 TMEM244Q5VVB8 128 aa4.02□□□□□ -1.77
VPS41-205ENST00000414632 TEX36Q5VZQ5 186 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms