RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 A0A1W2PPR1 153 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 XRCC2O43543 280 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 GOSR1O95249 250 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 IFNA6P05013 189 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 RRASP10301 218 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 PTGFRP43088 359 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 ERVS71-1P61550 626 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 ZNF92Q03936 586 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 PPP1R1AQ13522 171 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 UBE2V2Q15819 145 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 ACTBL2Q562R1 376 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 DMRTC1Q5HYR2 192 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 VAX1Q5SQQ9 334 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 FBXW12Q6X9E4 464 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 COMMD7Q86VX2 200 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 FAM89BQ8N5H3 189 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 CCDC54Q8NEL0 328 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 OR5D18Q8NGL1 313 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 OR1J1Q8NGS3 322 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 OR4K15Q8NH41 348 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 OR2AE1Q8NHA4 323 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 NPRL2Q8WTW4 380 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 C10orf35Q96D05 121 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 ARHGAP5-AS1Q96IT6 56 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 RBM14Q96PK6 669 aaKnown RBP8.48□□□□□ -1.05
DDB1-202ENST00000414411 OR2J1Q9GZK6 312 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 RGCCQ9H4X1 137 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 FN3KRPQ9HA64 309 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.48□□□□□ -1.05
DDB1-202ENST00000414411 KIF25Q9UIL4 384 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 ZNF391Q9UJN7 358 aa8.48□□□□□ -1.05
DDB1-202ENST00000414411 APCP25054 2843 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 ABCA12Q86UK0 2595 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 C9orf170A2RU37 121 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 FOXI3A8MTJ6 420 aaPredicted RBP8.47□□□□□ -1.05
DDB1-202ENST00000414411 E7EQL1 145 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 PMP2P02689 132 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 ZNF250P15622 560 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 HLA-GP17693 338 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 COL8A1P27658 744 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 FAM3AP98173 230 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 FGL1Q08830 312 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 MICBQ29980 383 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 MBNL2Q5VZF2 373 aaKnown RBP8.47□□□□□ -1.05
DDB1-202ENST00000414411 C1QL2Q7Z5L3 287 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 HOGA1Q86XE5 327 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 ARRDC1Q8N5I2 433 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 SLC25A40Q8TBP6 338 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 KLF14Q8TD94 323 aaPredicted RBP8.47□□□□□ -1.05
DDB1-202ENST00000414411 MITD1Q8WV92 249 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 NEUROG1Q92886 237 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 ZNF442Q9H7R0 627 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 ZNF230Q9UIE0 474 aaPredicted RBP8.47□□□□□ -1.05
DDB1-202ENST00000414411 PIGLQ9Y2B2 252 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 ARFGEF3Q5TH69 2177 aa8.47□□□□□ -1.05
DDB1-202ENST00000414411 hCG_38984A0A1B0GV85 526 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 DHRS7CA6NNS2 312 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 MGMTP16455 207 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 CBX5P45973 191 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 IL13RA1P78552 427 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 MALLQ13021 153 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 OR8B8Q15620 311 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 ZNF672Q499Z4 452 aaPredicted RBP8.46□□□□□ -1.05
DDB1-202ENST00000414411 SPATA46Q5T0L3 261 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 GSG1LQ6UXU4 331 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 CCDC28AQ8IWP9 274 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 ZNF295-AS1Q8N0V1 137 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 FBXW5Q969U6 566 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 REEP6Q96HR9 211 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 CYYR1Q96J86 154 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 PHB2Q99623 299 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 MFFQ9GZY8 342 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 ATP23Q9Y6H3 246 aa8.46□□□□□ -1.05
DDB1-202ENST00000414411 IGLV3-9A0A075B6K5 115 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 OR5H14A6NHG9 310 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 CEACAM18A8MTB9 384 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 CCSO14618 274 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 DUS4LO95620 317 aaKnown RBP8.46□□□□□ -1.06
DDB1-202ENST00000414411 COX6B1P14854 86 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 MPV17P39210 176 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 FABP6P51161 128 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 AP2S1P53680 142 aaPredicted RBP8.46□□□□□ -1.06
DDB1-202ENST00000414411 RPS23P62266 143 aaKnown RBP8.46□□□□□ -1.06
DDB1-202ENST00000414411 PSG7Q13046 419 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 ADIPOQQ15848 244 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 ZNF718Q3SXZ3 478 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 RGS7BPQ6MZT1 257 aaPredicted RBP8.46□□□□□ -1.06
DDB1-202ENST00000414411 TMEM65Q6PI78 240 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 ADAD2Q8NCV1 583 aaKnown RBP8.46□□□□□ -1.06
DDB1-202ENST00000414411 OR51T1Q8NGJ9 327 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 TERB2Q8NHR7 220 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 MARCH1Q8TCQ1 289 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 SCARB1Q8WTV0 552 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 ST8SIA4Q92187 359 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 TM2D1Q9BX74 207 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 CISD1Q9NZ45 108 aaKnown RBP8.46□□□□□ -1.06
DDB1-202ENST00000414411 UNC79Q9P2D8 2635 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 ITPR2Q14571 2701 aa8.46□□□□□ -1.06
DDB1-202ENST00000414411 RAI1Q7Z5J4 1906 aaPredicted RBP8.45□□□□□ -1.06
DDB1-202ENST00000414411 I3L521 148 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms