RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 EXOSC4Q9NPD3 245 aaKnown RBP9.59□□□□□ -0.87
LIMS2-210ENST00000413578 ZMAT5Q9UDW3 170 aaKnown RBP9.59□□□□□ -0.87
LIMS2-210ENST00000413578 A0A1W2PPI3 338 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 A0A1W2PQL4 384 aaPredicted RBP9.58□□□□□ -0.88
LIMS2-210ENST00000413578 FUOMA2VDF0 154 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 METTL15A6NJ78 407 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 ZAR1LA6NP61 321 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 C3orf84H3BNL1 204 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 RAMP3O60896 148 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 SULT1C4O75897 302 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 KDM4BO94953 1096 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 ZFPL1O95159 310 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 SERPINA3P01011 423 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 IGHG2P01859 326 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 KRT8P05787 483 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 SNRNP70P08621 437 aaKnown RBP9.58□□□□□ -0.88
LIMS2-210ENST00000413578 FAM106CPP0CH98 169 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 PTGFRP43088 359 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 KIR3DL2P43630 455 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 POU3F4P49335 361 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 SNU13P55769 128 aaKnown RBP9.58□□□□□ -0.88
LIMS2-210ENST00000413578 CBX1P83916 185 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 PDZK1IP1Q13113 114 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 Q6P435 159 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 UNQ9370/PRO34162Q6UXP9 181 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 COMMD1Q8N668 190 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 TCEANCQ8N8B7 351 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 OR9G1Q8NH87 305 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 RAX2Q96IS3 184 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 KIRREL1Q96J84 757 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 PRRG3Q9BZD7 231 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 LINC00574Q9H8X3 128 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 GLS2Q9UI32 602 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 GSTK1Q9Y2Q3 226 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 TENM2Q9NT68 2774 aa9.58□□□□□ -0.88
LIMS2-210ENST00000413578 KBTBD11-OT1A0A1B0GTJ5 212 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 TCRBV3S1A0A5B6 114 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 ZNF729A6NN14 1252 aaPredicted RBP9.57□□□□□ -0.88
LIMS2-210ENST00000413578 SLC33A1O00400 549 aaPredicted RBP9.57□□□□□ -0.88
LIMS2-210ENST00000413578 TOR1AO14656 332 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 SH2D1BO14796 132 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 MITFO75030 526 aaPredicted RBP9.57□□□□□ -0.88
LIMS2-210ENST00000413578 FKBP6O75344 327 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 UBCP0CG48 685 aaKnown RBP9.57□□□□□ -0.88
LIMS2-210ENST00000413578 ATF1P18846 271 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 PRRX1P54821 245 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 MTCP1P56278 107 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 DIAPH2-AS1Q14236 149 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 KPNB1Q14974 876 aaKnown RBP9.57□□□□□ -0.88
LIMS2-210ENST00000413578 LHFPL2Q6ZUX7 228 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 GID4Q8IVV7 300 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 ZNF695Q8IW36 515 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 RDH10Q8IZV5 341 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 KLHL30-AS1Q8NEE0 82 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 OR4D6Q8NGJ1 314 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 OR56B4Q8NH76 319 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 TFAP2CQ92754 450 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 TBX5Q99593 518 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 PCDHB16Q9NRJ7 776 aa9.57□□□□□ -0.88
LIMS2-210ENST00000413578 H2AFY2Q9P0M6 372 aaPredicted RBP9.57□□□□□ -0.88
LIMS2-210ENST00000413578 NUDT19A8MXV4 375 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 J3QR06 171 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 CYB5AP00167 134 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 MT-ND2P03891 347 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 OR2T7P0C7T2 308 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 PRKACBP22694 351 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 HTR1FP30939 366 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 LUMP51884 338 aaPredicted RBP9.56□□□□□ -0.88
LIMS2-210ENST00000413578 GP2P55259 537 aaKnown RBP9.56□□□□□ -0.88
LIMS2-210ENST00000413578 EBI3Q14213 229 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 RBM39Q14498 530 aaKnown RBP9.56□□□□□ -0.88
LIMS2-210ENST00000413578 CDK5R1Q15078 307 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 KRBOX4Q5JUW0 171 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 STPG2Q8N412 459 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 DRAM1Q8N682 238 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 RNF152Q8N8N0 203 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 CHST4Q8NCG5 386 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 TOMM40LQ969M1 308 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 UTP4Q969X6 686 aaKnown RBP9.56□□□□□ -0.88
LIMS2-210ENST00000413578 RPEQ96AT9 228 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 SPSB1Q96BD6 273 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 DUX3Q96PT4 197 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 IL4I1Q96RQ9 567 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 MBOAT4Q96T53 435 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 PPIL3Q9H2H8 161 aaKnown RBP9.56□□□□□ -0.88
LIMS2-210ENST00000413578 RHOFQ9HBH0 211 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 WARS2Q9UGM6 360 aaKnown RBP9.56□□□□□ -0.88
LIMS2-210ENST00000413578 LINC00527Q9UJ94 153 aa9.56□□□□□ -0.88
LIMS2-210ENST00000413578 LINC01548A6NM66 108 aa9.55□□□□□ -0.88
LIMS2-210ENST00000413578 SERPINE3A8MV23 424 aa9.55□□□□□ -0.88
LIMS2-210ENST00000413578 CCL24O00175 119 aa9.55□□□□□ -0.88
LIMS2-210ENST00000413578 APOL3O95236 402 aa9.55□□□□□ -0.88
LIMS2-210ENST00000413578 ZNF44P15621 663 aa9.55□□□□□ -0.88
LIMS2-210ENST00000413578 GNGT1P63211 74 aa9.55□□□□□ -0.88
LIMS2-210ENST00000413578 PAX5Q02548 391 aa9.55□□□□□ -0.88
LIMS2-210ENST00000413578 ZNF85Q03923 595 aa9.55□□□□□ -0.88
LIMS2-210ENST00000413578 ATXN7L3Q14CW9 347 aaPredicted RBP9.55□□□□□ -0.88
LIMS2-210ENST00000413578 KDM4DQ6B0I6 523 aa9.55□□□□□ -0.88
LIMS2-210ENST00000413578 SLC35E3Q7Z769 313 aa9.55□□□□□ -0.88
LIMS2-210ENST00000413578 SAXO1Q8IYX7 474 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms