RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 UBE2CO00762 179 aa16.39■□□□□ 0.21
TNFRSF8-202ENST00000413146 EDN3P14138 238 aa16.39■□□□□ 0.21
TNFRSF8-202ENST00000413146 CLINT1Q14677 625 aa16.39■□□□□ 0.21
TNFRSF8-202ENST00000413146 RIPPLY2Q5TAB7 128 aa16.39■□□□□ 0.21
TNFRSF8-202ENST00000413146 ABLIM2Q6H8Q1 611 aa16.39■□□□□ 0.21
TNFRSF8-202ENST00000413146 ZNF695Q8IW36 515 aa16.39■□□□□ 0.21
TNFRSF8-202ENST00000413146 SUMF1Q8NBK3 374 aa16.39■□□□□ 0.21
TNFRSF8-202ENST00000413146 OR10D3Q8NH80 312 aa16.39■□□□□ 0.21
TNFRSF8-202ENST00000413146 SNIP1Q8TAD8 396 aaKnown RBP16.39■□□□□ 0.21
TNFRSF8-202ENST00000413146 GPR35Q9HC97 309 aa16.39■□□□□ 0.21
TNFRSF8-202ENST00000413146 PLSCR2Q9NRY7 297 aa16.39■□□□□ 0.21
TNFRSF8-202ENST00000413146 SMIM6P0DI80 62 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 OR13C7P0DN81 318 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 CBR1P16152 277 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 RAB5AP20339 215 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 NPBWR2P48146 333 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 SULT1A1P50225 295 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 SPIN3Q5JUX0 258 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 OR2V1Q8NHB1 315 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 EXTL1Q92935 676 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 RPL36A-HNRNPH2H7BZ11 118 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 PITX3O75364 302 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 S100A9P06702 114 aaKnown RBP16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 TBC1D26Q86UD7 250 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 OR2G3Q8NGZ4 309 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 SLC7A10Q9NS82 523 aa16.38■□□□□ 0.21
TNFRSF8-202ENST00000413146 A0A1B0GW64 132 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 IGSF23A1L1A6 192 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 ZNF587BE7ETH6 402 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 TRAPPC6AO75865 159 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 GNRHRP30968 328 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 POLR2GP62487 172 aaKnown RBP eCLIP16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 CDCP2Q5VXM1 449 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 ZNF565Q8N9K5 539 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 hCG_1809904A0A1W2PP81 198 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 A0A1W2PR64 198 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 A0A1W2PRV1 198 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 SSSCA1O60232 199 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 WIPI1Q5MNZ9 446 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 WDR5BQ86VZ2 330 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM24BQ8N5W8 94 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 SUMF2Q8NBJ7 301 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 SPSB4Q96A44 273 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 POM121Q96HA1 1249 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 PAPOLGQ9BWT3 736 aaKnown RBP16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 SLC25A31Q9H0C2 315 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 C11orf1Q9H5F2 150 aa16.37■□□□□ 0.21
TNFRSF8-202ENST00000413146 TK1P04183 234 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 ARG1P05089 322 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 CFIP05156 583 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 RFPL3SP0C7P2 107 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 ZNF806P0C7X5 589 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 ATP6V0CP27449 155 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 VAMP2P63027 116 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 DAZAP2Q15038 168 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 TMEM56Q96MV1 263 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 C1QTNF5Q9BXJ0 243 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 PLEKHF2Q9H8W4 249 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 PILRBQ9UKJ0 227 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 TMEM56-RWDD3S4R434 201 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A10PA6NDY2 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A18PA6NE21 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A16PA6NEW6 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A20PA6NIJ5 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A8PA6NJQ4 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A7PA6NKC0 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A22PA8MWA6 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A12PA8MX19 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A5PA8MXJ8 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A23PA8MXZ1 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 GPR37O15354 613 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A15PP0C7V4 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A13PP0C7W8 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A14PP0C7W9 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 FAM90A24PP0C7X0 464 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 OMGP23515 440 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 RAB1AP62820 205 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 SOHLH1Q5JUK2 328 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 NANPQ8TBE9 248 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 ADGRG7Q96K78 797 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 PRDM14Q9GZV8 571 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 SMDT1Q9H4I9 107 aa16.36■□□□□ 0.21
TNFRSF8-202ENST00000413146 A0A1W2PPE2 198 aa16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 A0A1W2PPE3 182 aa16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 MMP7P09237 267 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 ITGA3P26006 1051 aa16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 FABP9Q0Z7S8 132 aa16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 TRA2AQ13595 282 aaKnown RBP eCLIP16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 PMS2CLQ68D20 193 aa16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 RBMS3Q6XE24 437 aaKnown RBP16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 Q6ZS49 121 aa16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 ABHD3Q8WU67 409 aa16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 LYRM2Q9NU23 88 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 SIT1Q9Y3P8 196 aa16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 WDFY3Q8IZQ1 3526 aa16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 HSPA12AO43301 675 aa16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 ADAM20O43506 726 aa16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 BCL3P20749 454 aa16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 CLDN15P56746 228 aa16.35■□□□□ 0.21
TNFRSF8-202ENST00000413146 RND3P61587 244 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms