RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 EIF1AYO14602 144 aaKnown RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 RAMP2O60895 175 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 NRASP01111 189 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 PRTN3P24158 256 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 PNPLA4P41247 253 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 EIF1AXP47813 144 aaKnown RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 RRADP55042 308 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 CDK3Q00526 305 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 FAM78BQ5VT40 261 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 RPL7L1Q6DKI1 246 aaKnown RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 Q6ZSR6 202 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 HFE2Q6ZVN8 426 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 CDRT4Q8N9R6 151 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 OR6K2Q8NGY2 324 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 DCUN1D4Q92564 292 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 RNF125Q96EQ8 232 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 CLEC1BQ9P126 229 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 RNF114Q9Y508 228 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 NPIPB5A8MRT5 1133 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 ANKRD66B4E2M5 251 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 LILRA1O75019 489 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 CD34P28906 385 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 GDF5P43026 501 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 GGTLC2Q14390 218 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 EFNB3Q15768 340 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 ZNF880Q6PDB4 577 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 LRRC61Q9BV99 259 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 CALHM2Q9HA72 323 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 TRAPPC2LQ9UL33 140 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 KLHDC2Q9Y2U9 406 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 TEX48A0A1B0GUV7 120 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 DXOO77932 396 aaKnown RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 HBZP02008 142 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 SRP19P09132 144 aaKnown RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 FTH1P19P0C7X4 201 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 PGCP20142 388 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 AOAHP28039 575 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 HIST1H1AQ02539 215 aaPredicted RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 IL15RAQ13261 267 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 ACKR1Q16570 336 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 FRG2Q64ET8 278 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 MFSD8Q8NHS3 518 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 NEURL3Q96EH8 262 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 FRG2BQ96QU4 278 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 MCRIP2Q9BUT9 160 aaKnown RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 RBM24Q9BX46 236 aaKnown RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 ULBP2Q9BZM5 246 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 SERTAD4Q9NUC0 356 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 OR5V1Q9UGF6 321 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 ZNF780BQ9Y6R6 833 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 COL4A2P08572 1712 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 FAM166BA8MTA8 275 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 ERI3O43414 337 aaKnown RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 CPSF4O95639 269 aaKnown RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 PFN1P07737 140 aaKnown RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 DANCRP0C864 163 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 PTHLHP12272 177 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 CDK2P24941 298 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 LINC00310P59036 64 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 SUMO1P63165 101 aaKnown RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 ZNF85Q03923 595 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 HIST3H3Q16695 136 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 TIGITQ495A1 244 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 OR2AJ1Q8NGZ0 328 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 OR13G1Q8NGZ3 307 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 IGSF8Q969P0 613 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 LMF2Q9BU23 707 aaKnown RBP4.54□□□□□ -1.68
HERC4-205ENST00000412272 C1QTNF4Q9BXJ3 329 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 PDFQ9HBH1 243 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 VDAC3Q9Y277 283 aa4.54□□□□□ -1.68
HERC4-205ENST00000412272 TRAV38-1A0A0B4J264 116 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 TRBV5-4A0A0C4DH59 114 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 RPS4Y1P22090 263 aaKnown RBP4.53□□□□□ -1.68
HERC4-205ENST00000412272 AQP1P29972 269 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 CMPK1P30085 196 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 CNN1P51911 297 aaKnown RBP4.53□□□□□ -1.68
HERC4-205ENST00000412272 FOXL1Q12952 345 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 ACOT6Q3I5F7 207 aaPredicted RBP4.53□□□□□ -1.68
HERC4-205ENST00000412272 C9orf57Q5W0N0 161 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 B3GALNT2Q8NCR0 500 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 OR10G9Q8NGN4 311 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 SYNPRQ8TBG9 265 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 NAA38Q9BRA0 125 aaKnown RBP4.53□□□□□ -1.68
HERC4-205ENST00000412272 CABLES2Q9BTV7 478 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 PARP12Q9H0J9 701 aaKnown RBP4.53□□□□□ -1.68
HERC4-205ENST00000412272 BCL2L10Q9HD36 194 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 FBXL17Q9UF56 701 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 HS3ST2Q9Y278 367 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 ZNF443Q9Y2A4 671 aaPredicted RBP4.53□□□□□ -1.68
HERC4-205ENST00000412272 YIPF1Q9Y548 306 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 HEATR5AQ86XA9 2040 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 GAGE10A6NGK3 116 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 CEACAM18A8MTB9 384 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 F2RL2O00254 374 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 TRAF3IP2O43734 574 aaPredicted RBP4.53□□□□□ -1.68
HERC4-205ENST00000412272 SERPINE2P07093 398 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 CD55P08174 381 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 SEC11BP0C7V7 166 aa4.53□□□□□ -1.68
HERC4-205ENST00000412272 NHLRC4P0CG21 123 aaPredicted RBP4.53□□□□□ -1.68
HERC4-205ENST00000412272 CD99P14209 185 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms