RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 PPYP01298 95 aa20.91■□□□□ 0.94
VRK2-202ENST00000412104 PDGFAP04085 211 aa20.91■□□□□ 0.94
VRK2-202ENST00000412104 RAB32Q13637 225 aa20.91■□□□□ 0.94
VRK2-202ENST00000412104 FAM76BQ5HYJ3 339 aa20.91■□□□□ 0.94
VRK2-202ENST00000412104 CXorf67Q86X51 503 aaPredicted RBP20.91■□□□□ 0.94
VRK2-202ENST00000412104 CXorf58Q96LI9 332 aa20.91■□□□□ 0.94
VRK2-202ENST00000412104 OR5AC2Q9NZP5 309 aa20.91■□□□□ 0.94
VRK2-202ENST00000412104 KCNIP3Q9Y2W7 256 aa20.91■□□□□ 0.94
VRK2-202ENST00000412104 ZFHX2Q9C0A1 2572 aaPredicted RBP20.91■□□□□ 0.94
VRK2-202ENST00000412104 FRYQ5TBA9 3013 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 WDR1O75083 606 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 OR5AC1P0C628 307 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 EIF2S3P41091 472 aaKnown RBP20.9■□□□□ 0.94
VRK2-202ENST00000412104 PSG7Q13046 419 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 SEM1Q6ZVN7 128 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 FAM219AQ8IW50 185 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 STARD4Q96DR4 205 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 RRNAD1Q96FB5 475 aaKnown RBP20.9■□□□□ 0.94
VRK2-202ENST00000412104 ARPC5LQ9BPX5 153 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 RSRP1Q9BUV0 290 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 OPN3Q9H1Y3 402 aaPredicted RBP20.9■□□□□ 0.94
VRK2-202ENST00000412104 GSKIPQ9P0R6 139 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 PROCRQ9UNN8 238 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 MEMO1Q9Y316 297 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 SHANK1Q9Y566 2161 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 TRAV24A0A0B4J272 114 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 CGAP01215 116 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 SCTP09683 121 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 P2RX3P56373 397 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 TMEM187Q14656 261 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 AANATQ16613 207 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 RGS7BPQ6MZT1 257 aaPredicted RBP20.9■□□□□ 0.94
VRK2-202ENST00000412104 C5orf24Q7Z6I8 188 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 ZNF610Q8N9Z0 462 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 SCCPDHQ8NBX0 429 aa20.9■□□□□ 0.94
VRK2-202ENST00000412104 GTF3AQ92664 365 aaKnown RBP20.9■□□□□ 0.94
VRK2-202ENST00000412104 MBD3L4A6NDZ8 208 aaPredicted RBP20.89■□□□□ 0.93
VRK2-202ENST00000412104 MBD3L3A6NE82 208 aaPredicted RBP20.89■□□□□ 0.93
VRK2-202ENST00000412104 MBD3L5A6NJ08 208 aaPredicted RBP20.89■□□□□ 0.93
VRK2-202ENST00000412104 HS3ST1O14792 307 aa20.89■□□□□ 0.93
VRK2-202ENST00000412104 SELEP16581 610 aa20.89■□□□□ 0.93
VRK2-202ENST00000412104 MPV17P39210 176 aa20.89■□□□□ 0.93
VRK2-202ENST00000412104 IAH1Q2TAA2 248 aaPredicted RBP20.89■□□□□ 0.93
VRK2-202ENST00000412104 SP6Q3SY56 376 aa20.89■□□□□ 0.93
VRK2-202ENST00000412104 OR11L1Q8NGX0 322 aa20.89■□□□□ 0.93
VRK2-202ENST00000412104 MBD3L2Q8NHZ7 208 aaPredicted RBP20.89■□□□□ 0.93
VRK2-202ENST00000412104 RDH5Q92781 318 aa20.89■□□□□ 0.93
VRK2-202ENST00000412104 MRPL24Q96A35 216 aaKnown RBP20.89■□□□□ 0.93
VRK2-202ENST00000412104 RHOFQ9HBH0 211 aa20.89■□□□□ 0.93
VRK2-202ENST00000412104 KIR2DS1A0A191URI9 304 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 hCG_1807616A0A1W2PRN6 198 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 F5H0A9 414 aaPredicted RBP20.88■□□□□ 0.93
VRK2-202ENST00000412104 PET100P0DJ07 73 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 KIR2DS4P43632 304 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 KIR2DS1Q14954 304 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 HERPUD1Q15011 391 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 GGNBP1Q5YKI7 109 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 THOC7Q6I9Y2 204 aaKnown RBP20.88■□□□□ 0.93
VRK2-202ENST00000412104 MRPL30Q8TCC3 161 aaKnown RBP20.88■□□□□ 0.93
VRK2-202ENST00000412104 KLF14Q8TD94 323 aaPredicted RBP20.88■□□□□ 0.93
VRK2-202ENST00000412104 DMRTA2Q96SC8 542 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 SUCNR1Q9BXA5 334 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 RIMS4Q9H426 269 aaPredicted RBP20.88■□□□□ 0.93
VRK2-202ENST00000412104 IFT22Q9H7X7 185 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 ATP23Q9Y6H3 246 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 PRRC2CQ9Y520 2896 aaKnown RBP20.88■□□□□ 0.93
VRK2-202ENST00000412104 MUC6Q6W4X9 2439 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 TRDCB7Z8K6 153 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 I3L521 148 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 IFNA21P01568 189 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 S100A10P60903 97 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 MARVELD3Q96A59 401 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 MED9Q9NWA0 146 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 RASL12Q9NYN1 266 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 POLDIP2Q9Y2S7 368 aa20.88■□□□□ 0.93
VRK2-202ENST00000412104 K7EM74 188 aa20.87■□□□□ 0.93
VRK2-202ENST00000412104 BET1O15155 118 aa20.87■□□□□ 0.93
VRK2-202ENST00000412104 TK1P04183 234 aa20.87■□□□□ 0.93
VRK2-202ENST00000412104 CECR9P0C854 216 aa20.87■□□□□ 0.93
VRK2-202ENST00000412104 ZNF154Q13106 437 aa20.87■□□□□ 0.93
VRK2-202ENST00000412104 RBMXL3Q8N7X1 1067 aaKnown RBP20.87■□□□□ 0.93
VRK2-202ENST00000412104 CCDC71LQ8N9Z2 235 aa20.87■□□□□ 0.93
VRK2-202ENST00000412104 RELL2Q8NC24 303 aaPredicted RBP20.87■□□□□ 0.93
VRK2-202ENST00000412104 SNIP1Q8TAD8 396 aaKnown RBP20.87■□□□□ 0.93
VRK2-202ENST00000412104 SYT3Q9BQG1 590 aa20.87■□□□□ 0.93
VRK2-202ENST00000412104 ZNF71Q9NQZ8 489 aaPredicted RBP20.87■□□□□ 0.93
VRK2-202ENST00000412104 INTS1Q8N201 2190 aaKnown RBP20.87■□□□□ 0.93
VRK2-202ENST00000412104 SLC34A2O95436 690 aa20.86■□□□□ 0.93
VRK2-202ENST00000412104 GLAP06280 429 aa20.86■□□□□ 0.93
VRK2-202ENST00000412104 Q6P435 159 aa20.86■□□□□ 0.93
VRK2-202ENST00000412104 C20orf204Q6ZNR8 217 aa20.86■□□□□ 0.93
VRK2-202ENST00000412104 Q8IYB0 196 aa20.86■□□□□ 0.93
VRK2-202ENST00000412104 OR1S1Q8NH92 325 aa20.86■□□□□ 0.93
VRK2-202ENST00000412104 SLC25A32Q9H2D1 315 aa20.86■□□□□ 0.93
VRK2-202ENST00000412104 TRBV6-6A0A0A6YYG2 114 aa20.86■□□□□ 0.93
VRK2-202ENST00000412104 MSGN1A6NI15 193 aa20.86■□□□□ 0.93
VRK2-202ENST00000412104 DIRAS3O95661 229 aa20.86■□□□□ 0.93
VRK2-202ENST00000412104 ZNF44P15621 663 aa20.86■□□□□ 0.93
VRK2-202ENST00000412104 ERVK11-1P61568 191 aa20.86■□□□□ 0.93
VRK2-202ENST00000412104 OR8G1Q15617 311 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms