RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 TBCEQ15813 527 aaPredicted RBP13.35□□□□□ -0.27
NOD1-202ENST00000411552 HCP5Q6MZN7 132 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 JAGN1Q8N5M9 183 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 CHST4Q8NCG5 386 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 FAM216AQ8WUB2 273 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 TMEM203Q969S6 136 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 MUL1Q969V5 352 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 ZDHHC16Q969W1 377 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 MGLLQ99685 303 aa13.35□□□□□ -0.27
NOD1-202ENST00000411552 hCG_1809904A0A1W2PP81 198 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 A0A1W2PPE2 198 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 A0A1W2PR64 198 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 A0A1W2PRV1 198 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 hADV38S2A0JD32 116 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 C17orf98A8MV24 154 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 SERPINA2P20848 420 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 ERP29P30040 261 aaKnown RBP13.34□□□□□ -0.27
NOD1-202ENST00000411552 UBE2E1P51965 193 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 P2RX3P56373 397 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 RPS25P62851 125 aaKnown RBP13.34□□□□□ -0.27
NOD1-202ENST00000411552 IL13RA2Q14627 380 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 SLC9A3R2Q15599 337 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 SLC22A6Q4U2R8 563 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 ZNF367Q7RTV3 350 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 CEACAM19Q7Z692 300 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 LYPD6Q86Y78 171 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 CDH26Q8IXH8 852 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 NKAIN3Q8N8D7 197 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 SPATA3Q8NHX4 192 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 S100A13Q99584 98 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 PPIL3Q9H2H8 161 aaKnown RBP13.34□□□□□ -0.27
NOD1-202ENST00000411552 ACOT13Q9NPJ3 140 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 MRPS28Q9Y2Q9 187 aaKnown RBP13.34□□□□□ -0.27
NOD1-202ENST00000411552 LINC00312Q9Y6C7 94 aa13.34□□□□□ -0.27
NOD1-202ENST00000411552 TRAV24A0A0B4J272 114 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 CLDN34H7C241 214 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 HOXA3O43365 443 aaPredicted RBP13.33□□□□□ -0.28
NOD1-202ENST00000411552 CSTBP04080 98 aaKnown RBP13.33□□□□□ -0.28
NOD1-202ENST00000411552 CSN2P05814 226 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 UCHL1P09936 223 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 RBM11P57052 281 aaKnown RBP13.33□□□□□ -0.28
NOD1-202ENST00000411552 AESQ08117 197 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 NHLRC3Q5JS37 347 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 Q6YL49 198 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 ZNF782Q6ZMW2 699 aaPredicted RBP13.33□□□□□ -0.28
NOD1-202ENST00000411552 TMEM91Q6ZNR0 172 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 LRRTM1Q86UE6 522 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 OSR2Q8N2R0 312 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 OR4D6Q8NGJ1 314 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 PHYHIPQ92561 330 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 ZNF714Q96N38 554 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 HEXA-AS1Q9H8Q6 139 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 ZMAT3Q9HA38 289 aaKnown RBP13.33□□□□□ -0.28
NOD1-202ENST00000411552 TCF7L1Q9HCS4 588 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 ZNF581Q9P0T4 197 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 ST3GAL6Q9Y274 331 aa13.33□□□□□ -0.28
NOD1-202ENST00000411552 SF3B6Q9Y3B4 125 aaKnown RBP13.33□□□□□ -0.28
NOD1-202ENST00000411552 A0A1W2PP11 408 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 MEIOCA2RUB1 952 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 MEGF11A6BM72 1044 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 HSPB6O14558 160 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 MRPS14O60783 128 aaKnown RBP13.32□□□□□ -0.28
NOD1-202ENST00000411552 ZNF780AO75290 641 aaPredicted RBP13.32□□□□□ -0.28
NOD1-202ENST00000411552 RBP4P02753 201 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 RNASE1P07998 156 aaKnown RBP13.32□□□□□ -0.28
NOD1-202ENST00000411552 MELTFP08582 738 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 SAA4P35542 130 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 GLIPR1P48060 266 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 EMX1Q04741 257 aaPredicted RBP13.32□□□□□ -0.28
NOD1-202ENST00000411552 ATXN7L3Q14CW9 347 aaPredicted RBP13.32□□□□□ -0.28
NOD1-202ENST00000411552 TRAM1Q15629 374 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 HSD17B12Q53GQ0 312 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 PAN3Q58A45 887 aaKnown RBP13.32□□□□□ -0.28
NOD1-202ENST00000411552 AWAT2Q6E213 333 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 GLIPR1L1Q6UWM5 242 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 SLC25A28Q96A46 364 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 COQ2Q96H96 371 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 ING3Q9NXR8 418 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 FAM96BQ9Y3D0 163 aa13.32□□□□□ -0.28
NOD1-202ENST00000411552 ANK2Q01484 3957 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 TENM1Q9UKZ4 2725 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 ODAMA1E959 279 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 FUOMA2VDF0 154 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 GEMIN2O14893 280 aaKnown RBP13.31□□□□□ -0.28
NOD1-202ENST00000411552 IGHV1-8P0DP01 117 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 GTF2F2P13984 249 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 SRMP19623 302 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 COX7A1P24310 79 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 PSMA1P25786 263 aaKnown RBP13.31□□□□□ -0.28
NOD1-202ENST00000411552 ACTG1P63261 375 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 GPR176Q14439 515 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 KRBOX4Q5JUW0 171 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 TRAPPC6BQ86SZ2 158 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 UQCC2Q9BRT2 126 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 YTHDF1Q9BYJ9 559 aaKnown RBP13.31□□□□□ -0.28
NOD1-202ENST00000411552 IFT22Q9H7X7 185 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 PCDHB16Q9NRJ7 776 aa13.31□□□□□ -0.28
NOD1-202ENST00000411552 UBE2J1Q9Y385 318 aaPredicted RBP13.31□□□□□ -0.28
NOD1-202ENST00000411552 TRGV10A0A0A0MS01 117 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 OR7C1O76099 320 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms