RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 PCDHB16Q9NRJ7 776 aa13.25□□□□□ -0.29
MRPL55-220ENST00000411464 KRT84Q9NSB2 600 aa13.25□□□□□ -0.29
MRPL55-220ENST00000411464 ZFP57Q9NU63 452 aa13.25□□□□□ -0.29
MRPL55-220ENST00000411464 ING3Q9NXR8 418 aa13.25□□□□□ -0.29
MRPL55-220ENST00000411464 IGKV1-9A0A0C4DH69 117 aa13.24□□□□□ -0.29
MRPL55-220ENST00000411464 ODAMA1E959 279 aa13.24□□□□□ -0.29
MRPL55-220ENST00000411464 ZNF44P15621 663 aa13.24□□□□□ -0.29
MRPL55-220ENST00000411464 ATF1P18846 271 aa13.24□□□□□ -0.29
MRPL55-220ENST00000411464 NFYBP25208 207 aa13.24□□□□□ -0.29
MRPL55-220ENST00000411464 LMO1P25800 156 aa13.24□□□□□ -0.29
MRPL55-220ENST00000411464 KRBOX4Q5JUW0 171 aa13.24□□□□□ -0.29
MRPL55-220ENST00000411464 C12orf73Q69YU5 71 aa13.24□□□□□ -0.29
MRPL55-220ENST00000411464 C8orf86Q6ZUL3 223 aa13.24□□□□□ -0.29
MRPL55-220ENST00000411464 LHFPL2Q6ZUX7 228 aa13.24□□□□□ -0.29
MRPL55-220ENST00000411464 PRSS35Q8N3Z0 413 aa13.24□□□□□ -0.29
MRPL55-220ENST00000411464 OR10H4Q8NGA5 316 aa13.24□□□□□ -0.29
MRPL55-220ENST00000411464 ADAT3Q96EY9 351 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-220ENST00000411464 A0A087X0M5 115 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 A0A1B0GX30 115 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 ZNF729A6NN14 1252 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-220ENST00000411464 ZAR1LA6NP61 321 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 SERPINE3A8MV23 424 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 EBAG9O00559 213 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 MITFO75030 526 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-220ENST00000411464 APOL3O95236 402 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 ZNF20P17024 532 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 EPHA2P29317 976 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 SLC35B1P78383 322 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 BNIP1Q12981 228 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 HES1Q14469 280 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 UTS2BQ765I0 119 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 FAM220AQ7Z4H9 259 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 CHST4Q8NCG5 386 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 KLHL30-AS1Q8NEE0 82 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 OR9G1Q8NH87 305 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 TFAP2CQ92754 450 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 TOMM40LQ969M1 308 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 RFT1Q96AA3 541 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 SPSB1Q96BD6 273 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 FGGYQ96C11 551 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 NOL4LQ96MY1 436 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-220ENST00000411464 OR6C3Q9NZP0 311 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 GNG8Q9UK08 70 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 AMMECR1Q9Y4X0 333 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-220ENST00000411464 U3KQK5 164 aa13.23□□□□□ -0.29
MRPL55-220ENST00000411464 TCRBV3S1A0A5B6 114 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 FAM90A18PA6NE21 464 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 FAM90A16PA6NEW6 464 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 FAM90A20PA6NIJ5 464 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 FAM90A9PA6NNJ1 464 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 FAM90A12PA8MX19 464 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 FAM90A5PA8MXJ8 464 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 RAMP3O60896 148 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 CSN2P05814 226 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 SNRNP70P08621 437 aaKnown RBP13.22□□□□□ -0.29
MRPL55-220ENST00000411464 FAM90A15PP0C7V4 464 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 FAM90A13PP0C7W8 464 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 FAM90A14PP0C7W9 464 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 FAM90A24PP0C7X0 464 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 HTR1FP30939 366 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 TMEM244Q5VVB8 128 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 COMMD1Q8N668 190 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 ZNF565Q8N9K5 539 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 OR56B4Q8NH76 319 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 HRASLS5Q96KN8 279 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 OPALINQ96PE5 141 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 COMMD4Q9H0A8 199 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 RHOFQ9HBH0 211 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 NEK6Q9HC98 313 aa13.22□□□□□ -0.29
MRPL55-220ENST00000411464 IGKV1-12A0A0C4DH73 117 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 KBTBD11-OT1A0A1B0GTJ5 212 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 H0YHG0 523 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 DEGS1O15121 323 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 KDM4BO94953 1096 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 IGKV1D-12P01611 117 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 TMEM11P17152 192 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 KIR3DL2P43630 455 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 GP2P55259 537 aaKnown RBP13.21□□□□□ -0.29
MRPL55-220ENST00000411464 RAB25P57735 213 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 HNF4GQ14541 408 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 C17orf58Q2M2W7 97 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 C18orf65Q6ZTR6 163 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 ZNF695Q8IW36 515 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 DRAM1Q8N682 238 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 C5orf56Q8N8D9 126 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 UTP4Q969X6 686 aaKnown RBP13.21□□□□□ -0.29
MRPL55-220ENST00000411464 SLC7A6OSQ96CW6 309 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-220ENST00000411464 COQ2Q96H96 371 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 P2RX4Q99571 388 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 ENOPH1Q9UHY7 261 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 LINC00527Q9UJ94 153 aa13.21□□□□□ -0.29
MRPL55-220ENST00000411464 G3V2T6 193 aa13.2□□□□□ -0.3
MRPL55-220ENST00000411464 J3QR06 171 aa13.2□□□□□ -0.3
MRPL55-220ENST00000411464 SLC33A1O00400 549 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-220ENST00000411464 GYG2O15488 501 aa13.2□□□□□ -0.3
MRPL55-220ENST00000411464 FGF16O43320 207 aa13.2□□□□□ -0.3
MRPL55-220ENST00000411464 MADCAM1Q13477 382 aa13.2□□□□□ -0.3
MRPL55-220ENST00000411464 ATXN7L3Q14CW9 347 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-220ENST00000411464 TP53I3Q53FA7 332 aa13.2□□□□□ -0.3
MRPL55-220ENST00000411464 UTF1Q5T230 341 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms