RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 C21orf140B9A014 251 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 NDUFC2-KCTD14E9PQ53 114 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 H3BTX0 84 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 EEF1E1O43324 174 aaKnown RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 GMDSO60547 372 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 ECI2O75521 394 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 STX11O75558 287 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 SC5DO75845 299 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRIM16O95361 564 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 GH2P01242 217 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 HLA-AP01891 365 aaKnown RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 HLA-HP01893 362 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 MBP02144 154 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 FTLP02792 175 aaPredicted RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 CRYGDP07320 174 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 SFTPCP11686 197 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 NQO1P15559 274 aaKnown RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 BTF3P20290 206 aaKnown RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 CXCR2P25025 360 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 PSMA3P25788 255 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 IL3RAP26951 378 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 HLA-DMBP28068 263 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 HTR1DP28221 377 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 PRDX2P32119 198 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 GABRA3P34903 492 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 ACTN2P35609 894 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 TUBP50607 506 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 DUSP3P51452 185 aaPredicted RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 ARL4CP56559 192 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 BSPH1Q075Z2 132 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 CSTF3Q12996 717 aaKnown RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 GAMTQ14353 236 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 CYTH1Q15438 398 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 TEX44Q53QW1 395 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 TCEAL5Q5H9L2 206 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 PLPP4Q5VZY2 271 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 TMEM53Q6P2H8 277 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 PLET1Q6UQ28 207 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 AMTNQ6UX39 209 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 ZYG11AQ6WRX3 759 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 PPP1R21Q6ZMI0 780 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 ZNF783Q6ZMS7 281 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 WDR88Q6ZMY6 472 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 MOB3CQ70IA8 216 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 FKBP9P1Q75LS8 142 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRMT10CQ7L0Y3 403 aaKnown RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 NIT1Q86X76 327 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 DHFR2Q86XF0 187 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 CEP97Q8IW35 865 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 CCDC60Q8IWA6 550 aaPredicted RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR8G5Q8NG78 346 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR1J4Q8NGS1 313 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR2T27Q8NH04 317 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR1L1Q8NH94 360 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 MOSPD2Q8NHP6 518 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 EXOC6Q8TAG9 804 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 GPX8Q8TED1 209 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 HEXDCQ8WVB3 486 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 TCEAL3Q969E4 200 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 LRRC39Q96DD0 335 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 MS4A10Q96PG2 267 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 KCNK16Q96T55 309 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 PLIN2Q99541 437 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 FERMT1Q9BQL6 677 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 NKX6-2Q9C056 277 aaPredicted RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 WDR12Q9GZL7 423 aaKnown RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 PRO3102Q9H379 93 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 TSPY26PQ9H489 355 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 POMKQ9H5K3 350 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 RANBP3Q9H6Z4 567 aaPredicted RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 NHEJ1Q9H9Q4 299 aaPredicted RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 PDE7BQ9NP56 450 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 YAE1D1Q9NRH1 226 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 MED17Q9NVC6 651 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 PNPOQ9NVS9 261 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 ANO10Q9NW15 660 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 TMEM242Q9NWH2 141 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 LYARQ9NX58 379 aaKnown RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 MRPL35Q9NZE8 188 aaKnown RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 COPG2Q9UBF2 871 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 TSPYL4Q9UJ04 414 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC22A14Q9Y267 594 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 ERGIC3Q9Y282 383 aa-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 TBL2Q9Y4P3 447 aaKnown RBP-2.34□□□□□ -2.78
RNU4-88P-201ENST00000411220 KIAA0556O60303 1618 aa-2.35□□□□□ -2.78
RNU4-88P-201ENST00000411220 WNK3Q9BYP7 1800 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 TEX49A0A1B0GTD5 131 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 GABRR3A8MPY1 467 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 CCL24O00175 119 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 KPNA3O00505 521 aaPredicted RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 KPNA4O00629 521 aaPredicted RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 PIN1P1O15428 100 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 MITFO75030 526 aaPredicted RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 COQ9O75208 318 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 PMP2P02689 132 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 UGT2B4P06133 528 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 MSMBP08118 114 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR2T7P0C7T2 308 aa-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 SAGP10523 405 aaPredicted RBP-2.35□□□□□ -2.79
RNU4-88P-201ENST00000411220 HSPD1P10809 573 aaKnown RBP-2.35□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms