RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 P2RY1P47900 373 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 SRYQ05066 204 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 IL13RA2Q14627 380 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 FBXW12Q6X9E4 464 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 C5orf24Q7Z6I8 188 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 LINC00518Q8N0U6 118 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 SLC35G3Q8N808 338 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 OR2M7Q8NG81 312 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 OR4D5Q8NGN0 318 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 GINS3Q9BRX5 216 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 SCRT1Q9BWW7 348 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 PARP12Q9H0J9 701 aaKnown RBP13.65□□□□□ -0.22
HOXD3-202ENST00000410016 FAM212BQ9NTI7 297 aaPredicted RBP13.65□□□□□ -0.22
HOXD3-202ENST00000410016 ZFP57Q9NU63 452 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 ST8SIA3O43173 380 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 HLA-HP01893 362 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 UCP2P55851 309 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 HERV-K104P61576 105 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 NHLH2Q02577 135 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 C9orf135Q5VTT2 229 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 RAB11FIP2Q7L804 512 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 TUSC5Q8IXB3 177 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 EXTL1Q92935 676 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 KIRREL1Q96J84 757 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 USB1Q9BQ65 265 aaKnown RBP13.65□□□□□ -0.22
HOXD3-202ENST00000410016 FAM173AQ9BQD7 235 aa13.65□□□□□ -0.22
HOXD3-202ENST00000410016 PAPOLGQ9BWT3 736 aaKnown RBP13.65□□□□□ -0.22
HOXD3-202ENST00000410016 AHCTF1Q8WYP5 2266 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 C3orf85A0A1B0GTC6 90 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 NAPSAO96009 420 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 GLAP06280 429 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 PRDX4Q13162 271 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 LPAL2Q16609 132 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 SRSF7Q16629 238 aaKnown RBP eCLIP13.64□□□□□ -0.23
HOXD3-202ENST00000410016 TCEAL6Q6IPX3 200 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 ZNF600Q6ZNG1 722 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 CCDC71LQ8N9Z2 235 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 TCEAL3Q969E4 200 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 TAAR9Q96RI9 348 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 ZPBPQ9BS86 351 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 HES7Q9BYE0 225 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 C11orf1Q9H5F2 150 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 KLF2Q9Y5W3 355 aaPredicted RBP13.64□□□□□ -0.23
HOXD3-202ENST00000410016 MEX3AA1L020 520 aaKnown RBP13.64□□□□□ -0.23
HOXD3-202ENST00000410016 C9orf172C9J069 976 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 SS18L1O75177 396 aaPredicted RBP13.64□□□□□ -0.23
HOXD3-202ENST00000410016 CCNOP22674 350 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 HAAOP46952 286 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 CDCP2Q5VXM1 449 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 SLAMF9Q96A28 289 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 TMEM222Q9H0R3 208 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 Q9N2K0 584 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 MTCH1Q9NZJ7 389 aa13.64□□□□□ -0.23
HOXD3-202ENST00000410016 RCL1Q9Y2P8 373 aaKnown RBP13.64□□□□□ -0.23
HOXD3-202ENST00000410016 C5orf49A4QMS7 147 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 FHITP49789 147 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 GPM6AP51674 278 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 FGF12P61328 243 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 SWI5Q1ZZU3 235 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 CEACAM21Q3KPI0 293 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 FAM76BQ5HYJ3 339 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 SAXO1Q8IYX7 474 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 GUCD1Q96NT3 240 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 SCTP09683 121 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 LMO1P25800 156 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 SNCAP37840 140 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 FIP1L1Q6UN15 594 aaKnown RBP13.63□□□□□ -0.23
HOXD3-202ENST00000410016 MEX3BQ6ZN04 569 aaKnown RBP13.63□□□□□ -0.23
HOXD3-202ENST00000410016 TMEM56Q96MV1 263 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 CALHM2Q9HA72 323 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 IL36RNQ9UBH0 155 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 CACFD1Q9UGQ2 172 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 MLXQ9UH92 298 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 TMEM56-RWDD3S4R434 201 aa13.63□□□□□ -0.23
HOXD3-202ENST00000410016 BORCS7-ASMTA0A0B4J1R7 106 aa13.62□□□□□ -0.23
HOXD3-202ENST00000410016 NKX2-6A6NCS4 301 aa13.62□□□□□ -0.23
HOXD3-202ENST00000410016 NGFP01138 241 aa13.62□□□□□ -0.23
HOXD3-202ENST00000410016 COX5BP10606 129 aa13.62□□□□□ -0.23
HOXD3-202ENST00000410016 POLR2GP62487 172 aaKnown RBP eCLIP13.62□□□□□ -0.23
HOXD3-202ENST00000410016 HERPUD1Q15011 391 aa13.62□□□□□ -0.23
HOXD3-202ENST00000410016 MIDNQ504T8 468 aa13.62□□□□□ -0.23
HOXD3-202ENST00000410016 FAM185AQ8N0U4 392 aa13.62□□□□□ -0.23
HOXD3-202ENST00000410016 SECTM1Q8WVN6 248 aa13.62□□□□□ -0.23
HOXD3-202ENST00000410016 AKR1E2Q96JD6 320 aa13.62□□□□□ -0.23
HOXD3-202ENST00000410016 DDA1Q9BW61 102 aa13.62□□□□□ -0.23
HOXD3-202ENST00000410016 SH3BGRL3Q9H299 93 aa13.62□□□□□ -0.23
HOXD3-202ENST00000410016 SAV1Q9H4B6 383 aaPredicted RBP13.62□□□□□ -0.23
HOXD3-202ENST00000410016 COLQQ9Y215 455 aaPredicted RBP13.62□□□□□ -0.23
HOXD3-202ENST00000410016 A0A1W2PNU3 283 aaPredicted RBP13.61□□□□□ -0.23
HOXD3-202ENST00000410016 TRDCB7Z8K6 153 aa13.61□□□□□ -0.23
HOXD3-202ENST00000410016 PRSS44E7EML9 344 aa13.61□□□□□ -0.23
HOXD3-202ENST00000410016 CDS2O95674 445 aa13.61□□□□□ -0.23
HOXD3-202ENST00000410016 NME2P1O60361 137 aa13.61□□□□□ -0.23
HOXD3-202ENST00000410016 TSPAN15O95858 294 aa13.61□□□□□ -0.23
HOXD3-202ENST00000410016 BTF3P20290 206 aaKnown RBP13.61□□□□□ -0.23
HOXD3-202ENST00000410016 MAGEA5P43359 124 aa13.61□□□□□ -0.23
HOXD3-202ENST00000410016 ZNF818PQ6ZRF7 136 aa13.61□□□□□ -0.23
HOXD3-202ENST00000410016 DPPA2Q7Z7J5 298 aa13.61□□□□□ -0.23
HOXD3-202ENST00000410016 TBC1D26Q86UD7 250 aa13.61□□□□□ -0.23
HOXD3-202ENST00000410016 ZDHHC23Q8IYP9 409 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms