RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 ACAA1P09110 424 aaPredicted RBP6.4□□□□□ -1.39
CXCR4-202ENST00000409817 CTXN2P0C2S0 81 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 PGAM2P15259 253 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 BCL3P20749 454 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 SSTR2P30874 369 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 KIR2DS4P43632 304 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 NPBWR2P48146 333 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 RAB14P61106 215 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 SORDQ00796 357 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 OR2F1Q13607 317 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 RBM39Q14498 530 aaKnown RBP6.4□□□□□ -1.39
CXCR4-202ENST00000409817 KIR3DS1Q14943 382 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 KIR2DS1Q14954 304 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 C11orf87Q6NUJ2 197 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 CLEC18BQ6UXF7 455 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 SGPP2Q8IWX5 399 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 CASTOR1Q8WTX7 329 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 SLAMF9Q96A28 289 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 PIK3IP1Q96FE7 263 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 DPCDQ9BVM2 203 aaPredicted RBP6.4□□□□□ -1.39
CXCR4-202ENST00000409817 MFFQ9GZY8 342 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 FXYD6Q9H0Q3 95 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 OR51I2Q9H344 312 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 MS4A5Q9H3V2 200 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 MTCH1Q9NZJ7 389 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 AMDHD2Q9Y303 409 aa6.4□□□□□ -1.39
CXCR4-202ENST00000409817 DOCK7Q96N67 2140 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 IGKV1D-8A0A087WSZ0 117 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 TRAV14DV4A0A0A6YYC5 116 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 TRBV6-6A0A0A6YYG2 114 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 MKRN2OSH3BPM6 223 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 H7C1Q1 480 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 TNFSF13O75888 250 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 MPC2O95563 127 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 NAPSAO96009 420 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 IFNA2P01563 188 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 PET100P0DJ07 73 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 RPS2P15880 293 aaKnown RBP6.39□□□□□ -1.39
CXCR4-202ENST00000409817 TIMP3P35625 211 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 RBMXP38159 391 aaKnown RBP6.39□□□□□ -1.39
CXCR4-202ENST00000409817 IDH3GP51553 393 aaPredicted RBP6.39□□□□□ -1.39
CXCR4-202ENST00000409817 UCP2P55851 309 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 C3orf36Q3SXR2 165 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 CLLU1Q5K131 121 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 OR2T2Q6IF00 324 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 HAGHLQ6PII5 290 aaPredicted RBP6.39□□□□□ -1.39
CXCR4-202ENST00000409817 TMUB2Q71RG4 321 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 KCTD9Q7L273 389 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 ZNF546Q86UE3 836 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 SLC51BQ86UW2 128 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 OR5M9Q8NGP3 310 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 THAP6Q8TBB0 222 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 PPP1R1CQ8WVI7 109 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 MAFIPQ8WZ33 124 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 EXTL1Q92935 676 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 GALNT14Q96FL9 552 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 SYT3Q9BQG1 590 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 HDHD3Q9BSH5 251 aaPredicted RBP6.39□□□□□ -1.39
CXCR4-202ENST00000409817 BCL2L14Q9BZR8 327 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 FGF23Q9GZV9 251 aaPredicted RBP6.39□□□□□ -1.39
CXCR4-202ENST00000409817 ARL6Q9H0F7 186 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 C1orf123Q9NWV4 160 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 TREM2Q9NZC2 230 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 DKK4Q9UBT3 224 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 KCNIP3Q9Y2W7 256 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 MEMO1Q9Y316 297 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 TRBV6-7A0A0A0MS04 114 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 LINC00862A6NCI5 91 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 C5orf51A6NDU8 294 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 CRYM-AS1A6NIL9 109 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 NOS1APO75052 506 aaPredicted RBP6.39□□□□□ -1.39
CXCR4-202ENST00000409817 B3GALNT1O75752 331 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 CGAP01215 116 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 IGLV1-44P01699 117 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 ZNF728P0DKX0 622 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 PSMB6P28072 239 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 OPRM1P35372 400 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 MDH2P40926 338 aaKnown RBP6.39□□□□□ -1.39
CXCR4-202ENST00000409817 SUPT4H1P63272 117 aaKnown RBP6.39□□□□□ -1.39
CXCR4-202ENST00000409817 EXOSC2Q13868 293 aaKnown RBP6.39□□□□□ -1.39
CXCR4-202ENST00000409817 SHEQ5VZ18 495 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 ZNF585AQ6P3V2 769 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 VWA1Q6PCB0 445 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 SLC22A25Q6T423 547 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 ACOT7LQ6ZUV0 252 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 ASCL5Q7RTU5 278 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 SLC38A6Q8IZM9 456 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 FAM185AQ8N0U4 392 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 FAM58AQ8N1B3 248 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 CCDC71LQ8N9Z2 235 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 WDR31Q8NA23 367 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 SPERTQ8NA61 448 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 BHLHE23Q8NDY6 225 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 MOB3AQ96BX8 217 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 STARD4Q96DR4 205 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 OR2J1Q9GZK6 312 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 CHMP1AQ9HD42 196 aaPredicted RBP6.39□□□□□ -1.39
CXCR4-202ENST00000409817 ZNF71Q9NQZ8 489 aaPredicted RBP6.39□□□□□ -1.39
CXCR4-202ENST00000409817 TNFSF18Q9UNG2 199 aa6.39□□□□□ -1.39
CXCR4-202ENST00000409817 RIF1Q5UIP0 2472 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms