RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 PNKDQ8N490 385 aa25.48■■□□□ 1.67
TRAF3IP1-203ENST00000409739 FAM216AQ8WUB2 273 aa25.48■■□□□ 1.67
TRAF3IP1-203ENST00000409739 TMEM203Q969S6 136 aa25.48■■□□□ 1.67
TRAF3IP1-203ENST00000409739 MUL1Q969V5 352 aa25.48■■□□□ 1.67
TRAF3IP1-203ENST00000409739 S100A13Q99584 98 aa25.48■■□□□ 1.67
TRAF3IP1-203ENST00000409739 ACOT13Q9NPJ3 140 aa25.48■■□□□ 1.67
TRAF3IP1-203ENST00000409739 A0A1W2PRD5 423 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 A0A1W2PRF3 423 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 A0A1W2PRM7 423 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 hADV38S2A0JD32 116 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 C17orf98A8MV24 154 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 NPFFO15130 113 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 ZNF728P0DKX0 622 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 SERPINA2P20848 420 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 ERP29P30040 261 aaKnown RBP25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 UBE2E1P51965 193 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 P2RX3P56373 397 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 ERVFRD-1P60508 538 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 CEACAM19Q7Z692 300 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 ZDHHC16Q969W1 377 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 MRPS28Q9Y2Q9 187 aaKnown RBP25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 LINC00312Q9Y6C7 94 aa25.47■■□□□ 1.67
TRAF3IP1-203ENST00000409739 hCG_1809904A0A1W2PP81 198 aa25.46■■□□□ 1.67
TRAF3IP1-203ENST00000409739 A0A1W2PPE2 198 aa25.46■■□□□ 1.67
TRAF3IP1-203ENST00000409739 A0A1W2PR64 198 aa25.46■■□□□ 1.67
TRAF3IP1-203ENST00000409739 A0A1W2PRV1 198 aa25.46■■□□□ 1.67
TRAF3IP1-203ENST00000409739 CSTBP04080 98 aaKnown RBP25.46■■□□□ 1.67
TRAF3IP1-203ENST00000409739 CSN2P05814 226 aa25.46■■□□□ 1.67
TRAF3IP1-203ENST00000409739 NHLRC3Q5JS37 347 aa25.46■■□□□ 1.67
TRAF3IP1-203ENST00000409739 OSR2Q8N2R0 312 aa25.46■■□□□ 1.67
TRAF3IP1-203ENST00000409739 SPATA3Q8NHX4 192 aa25.46■■□□□ 1.67
TRAF3IP1-203ENST00000409739 ZNF714Q96N38 554 aa25.46■■□□□ 1.67
TRAF3IP1-203ENST00000409739 PPIL3Q9H2H8 161 aaKnown RBP25.46■■□□□ 1.67
TRAF3IP1-203ENST00000409739 ZMAT3Q9HA38 289 aaKnown RBP25.46■■□□□ 1.67
TRAF3IP1-203ENST00000409739 A0A1W2PP11 408 aa25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 MRPS14O60783 128 aaKnown RBP25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 RBP4P02753 201 aa25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 UCHL1P09936 223 aa25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 RBM11P57052 281 aaKnown RBP25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 SLC9A3R2Q15599 337 aa25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 SLC22A6Q4U2R8 563 aa25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 Q6YL49 198 aa25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 TMEM91Q6ZNR0 172 aa25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 OR4D6Q8NGJ1 314 aa25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 PHYHIPQ92561 330 aa25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 TCF7L1Q9HCS4 588 aa25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 ST3GAL6Q9Y274 331 aa25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 SF3B6Q9Y3B4 125 aaKnown RBP25.45■■□□□ 1.66
TRAF3IP1-203ENST00000409739 STAB1Q9NY15 2570 aa25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 TRAV24A0A0B4J272 114 aa25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 MEGF11A6BM72 1044 aa25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 CLDN34H7C241 214 aa25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 HOXA3O43365 443 aaPredicted RBP25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 ZNF780AO75290 641 aaPredicted RBP25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 EMX1Q04741 257 aaPredicted RBP25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 AESQ08117 197 aa25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 ATXN7L3Q14CW9 347 aaPredicted RBP25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 TRAM1Q15629 374 aa25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 HSD17B12Q53GQ0 312 aa25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 AWAT2Q6E213 333 aa25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 ZNF782Q6ZMW2 699 aaPredicted RBP25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 LRRTM1Q86UE6 522 aa25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 COQ2Q96H96 371 aa25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 ZNF581Q9P0T4 197 aa25.44■■□□□ 1.66
TRAF3IP1-203ENST00000409739 HSPB6O14558 160 aa25.43■■□□□ 1.66
TRAF3IP1-203ENST00000409739 MELTFP08582 738 aa25.43■■□□□ 1.66
TRAF3IP1-203ENST00000409739 PSMA1P25786 263 aaKnown RBP25.43■■□□□ 1.66
TRAF3IP1-203ENST00000409739 SAA4P35542 130 aa25.43■■□□□ 1.66
TRAF3IP1-203ENST00000409739 GLIPR1P48060 266 aa25.43■■□□□ 1.66
TRAF3IP1-203ENST00000409739 PAN3Q58A45 887 aaKnown RBP25.43■■□□□ 1.66
TRAF3IP1-203ENST00000409739 GLIPR1L1Q6UWM5 242 aa25.43■■□□□ 1.66
TRAF3IP1-203ENST00000409739 UQCC2Q9BRT2 126 aa25.43■■□□□ 1.66
TRAF3IP1-203ENST00000409739 YTHDF1Q9BYJ9 559 aaKnown RBP25.43■■□□□ 1.66
TRAF3IP1-203ENST00000409739 FUOMA2VDF0 154 aa25.42■■□□□ 1.66
TRAF3IP1-203ENST00000409739 RNASE1P07998 156 aaKnown RBP25.42■■□□□ 1.66
TRAF3IP1-203ENST00000409739 TRAPPC6BQ86SZ2 158 aa25.42■■□□□ 1.66
TRAF3IP1-203ENST00000409739 SVOPQ8N4V2 548 aa25.42■■□□□ 1.66
TRAF3IP1-203ENST00000409739 HEXA-AS1Q9H8Q6 139 aa25.42■■□□□ 1.66
TRAF3IP1-203ENST00000409739 PCDHB16Q9NRJ7 776 aa25.42■■□□□ 1.66
TRAF3IP1-203ENST00000409739 DNHD1Q96M86 4753 aa25.42■■□□□ 1.66
TRAF3IP1-203ENST00000409739 MEIOCA2RUB1 952 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 GEMIN2O14893 280 aaKnown RBP25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 GTF2F2P13984 249 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 SRMP19623 302 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 COX7A1P24310 79 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 GABRA5P31644 462 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 ACTG1P63261 375 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 GPR176Q14439 515 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 SSX1Q16384 188 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 KRBOX4Q5JUW0 171 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 LINC00596Q86U02 117 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 SLC25A28Q96A46 364 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 IFT22Q9H7X7 185 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 ING3Q9NXR8 418 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 UBE2J1Q9Y385 318 aaPredicted RBP25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 FAM96BQ9Y3D0 163 aa25.41■■□□□ 1.66
TRAF3IP1-203ENST00000409739 ODAMA1E959 279 aa25.4■■□□□ 1.66
TRAF3IP1-203ENST00000409739 OR7C1O76099 320 aaPredicted RBP25.4■■□□□ 1.66
TRAF3IP1-203ENST00000409739 IGHV1-8P0DP01 117 aa25.4■■□□□ 1.66
TRAF3IP1-203ENST00000409739 FABP5Q01469 135 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms