RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 LZTFL1Q9NQ48 299 aa1.13□□□□□ -2.23
PMS1-203ENST00000409593 CHRAC1Q9NRG0 131 aa1.13□□□□□ -2.23
PMS1-203ENST00000409593 SLC23A2Q9UGH3 650 aa1.13□□□□□ -2.23
PMS1-203ENST00000409593 VPREB3Q9UKI3 123 aa1.13□□□□□ -2.23
PMS1-203ENST00000409593 ADGRB3O60242 1522 aa1.13□□□□□ -2.23
PMS1-203ENST00000409593 PHLPP2Q6ZVD8 1323 aa1.12□□□□□ -2.23
PMS1-203ENST00000409593 A0A1B0GTI1 187 aa1.12□□□□□ -2.23
PMS1-203ENST00000409593 CECR9P0C854 216 aa1.12□□□□□ -2.23
PMS1-203ENST00000409593 TUBG1P23258 451 aa1.12□□□□□ -2.23
PMS1-203ENST00000409593 IVDP26440 423 aa1.12□□□□□ -2.23
PMS1-203ENST00000409593 HIST1H2BAQ96A08 127 aa1.12□□□□□ -2.23
PMS1-203ENST00000409593 DDIT4LQ96D03 193 aa1.12□□□□□ -2.23
PMS1-203ENST00000409593 FMC1Q96HJ9 113 aa1.12□□□□□ -2.23
PMS1-203ENST00000409593 ARL6Q9H0F7 186 aa1.12□□□□□ -2.23
PMS1-203ENST00000409593 TUBG2Q9NRH3 451 aa1.12□□□□□ -2.23
PMS1-203ENST00000409593 TRAV8-7A0A075B6U6 113 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 IGHV1-45A0A0A0MS14 117 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 IGKV2-29A2NJV5 120 aaPredicted RBP1.11□□□□□ -2.23
PMS1-203ENST00000409593 H3BRN7 92 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 RAB36O95755 333 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 PSKH1P11801 424 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 M6PRP20645 277 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 CCT6AP40227 531 aaKnown RBP1.11□□□□□ -2.23
PMS1-203ENST00000409593 C10orf91Q5T1B1 145 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 NXNL2Q5VZ03 156 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 GLYATQ6IB77 296 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 C2orf73Q8N5S3 287 aaPredicted RBP1.11□□□□□ -2.23
PMS1-203ENST00000409593 FER1L6-AS1Q8NA97 138 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 ZNF625Q96I27 306 aaPredicted RBP1.11□□□□□ -2.23
PMS1-203ENST00000409593 ADTRPQ96IZ2 230 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 LINC01587Q99440 93 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 KCNIP2Q9NS61 270 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 NOS1P29475 1434 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 SHANK3Q9BYB0 1731 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 CR1P17927 2039 aa1.11□□□□□ -2.23
PMS1-203ENST00000409593 TRIM64CA6NLI5 447 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 ALOX12BO75342 701 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 LIPCP11150 499 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 RALBP11234 206 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 ELK4P28324 431 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 CRABP1P29762 137 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 P2RY2P41231 377 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 HES1Q14469 280 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 NDUFAF6Q330K2 333 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 HIKESHIQ53FT3 197 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 PIP5KL1Q5T9C9 394 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 OR5T3Q8NGG3 340 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 OR4A5Q8NH83 315 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 CCL17Q92583 94 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 CENPNQ96H22 339 aaPredicted RBP1.1□□□□□ -2.23
PMS1-203ENST00000409593 DNAJC30Q96LL9 226 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 CHRNA10Q9GZZ6 450 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 BLZF1Q9H2G9 400 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 POMKQ9H5K3 350 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 WDR55Q9H6Y2 383 aaPredicted RBP1.1□□□□□ -2.23
PMS1-203ENST00000409593 SDK1Q7Z5N4 2213 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 TRPM6Q9BX84 2022 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 LOC100653049A0A140TA62 436 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 A0A1W2PQL4 384 aaPredicted RBP1.1□□□□□ -2.23
PMS1-203ENST00000409593 A0A1W2PRG6 482 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 RBFOX3A6NFN3 312 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 ODF3BA8MYP8 253 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 ZNF593O00488 134 aaPredicted RBP1.1□□□□□ -2.23
PMS1-203ENST00000409593 LECT2O14960 151 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 KRT34O76011 436 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 GYPCP04921 128 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 GPR4P46093 362 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 BCAP31P51572 246 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 CLDN8P56748 225 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 RAB25P57735 213 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 PSMC5P62195 406 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 TPGS1Q6ZTW0 290 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 NIT1Q86X76 327 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 CA13Q8N1Q1 262 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 FBXO36Q8NEA4 188 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 OR11G2Q8NGC1 345 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 OR4C16Q8NGL9 310 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 CMBLQ96DG6 245 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 CPB2Q96IY4 423 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 BEX2Q9BXY8 128 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 DNAJC27Q9NZQ0 273 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 KPTNQ9Y664 436 aa1.1□□□□□ -2.23
PMS1-203ENST00000409593 FNDC10F2Z333 226 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 H3BP45 60 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 ETHE1O95571 254 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 GZMBP10144 247 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 DAOAP59103 153 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 DYNC1I2Q13409 638 aaKnown RBP1.09□□□□□ -2.24
PMS1-203ENST00000409593 CEACAM16Q2WEN9 425 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 CEACAM21Q3KPI0 293 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 ELP2Q6IA86 826 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 FAM43BQ6ZT52 329 aaPredicted RBP1.09□□□□□ -2.24
PMS1-203ENST00000409593 MUC15Q8N387 334 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 ATPAF2Q8N5M1 289 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 DEFB119Q8N690 84 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 OR10P1Q8NGE3 313 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 OLFM3Q96PB7 478 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 SLC25A31Q9H0C2 315 aa1.09□□□□□ -2.24
PMS1-203ENST00000409593 RPUSD1Q9UJJ7 312 aaKnown RBP1.09□□□□□ -2.24
PMS1-203ENST00000409593 PHLDA3Q9Y5J5 127 aa1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms