RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 MYPOPQ86VE0 399 aaPredicted RBP13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 OR1S2Q8NGQ3 325 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 RNASE11Q8TAA1 199 aaKnown RBP13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 WDYHV1Q96HA8 205 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 CNTNAP3BQ96NU0 1288 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 FAM117AQ9C073 453 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 TMPRSS5Q9H3S3 457 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 ASF1BQ9NVP2 202 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 COMMD9Q9P000 198 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 ANXA10Q9UJ72 324 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 ZNF391Q9UJN7 358 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 STARD10Q9Y365 291 aa13.07□□□□□ -0.32
SCAMP4-202ENST00000409472 ESPL1Q14674 2120 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 SLC25A4P12235 298 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 CD46P15529 392 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 NPBWR1P48145 328 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 LUMP51884 338 aaPredicted RBP13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 PRDX4Q13162 271 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 ZNF345Q14585 488 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 KCNRGQ8N5I3 272 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 RRNAD1Q96FB5 475 aaKnown RBP13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 OR10C1Q96KK4 312 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 REPIN1Q9BWE0 567 aaKnown RBP13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 COLCA2A8K830 154 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 BCL2L11O43521 198 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 GPM6AP51674 278 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 C9orf152Q5JTZ5 239 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 ARL11Q969Q4 196 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 SLAMF9Q96A28 289 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 POM121L2Q96KW2 1035 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 IP6K3Q96PC2 410 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 EGLN1Q9GZT9 426 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 CHMP1AQ9HD42 196 aaPredicted RBP13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 SMCO4Q9NRQ5 59 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 SLC7A11Q9UPY5 501 aa13.06□□□□□ -0.32
SCAMP4-202ENST00000409472 A0A1B0GWJ7 208 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 A0A1W2PR80 420 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 CA11O75493 328 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 CLN5O75503 358 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 OR2F2O95006 317 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 PGAM2P15259 253 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 BCL3P20749 454 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 WNT5AP41221 380 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 RBM11P57052 281 aaKnown RBP13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 OR2F1Q13607 317 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 SSX2Q16385 188 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 MCEMP1Q8IX19 187 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 BOLLQ8N9W6 283 aaKnown RBP13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 TLNRD1Q9H1K6 362 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 ACKR4Q9NPB9 350 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 TRGV5A0A0B4J1U4 118 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 CDRT15L2A8MXV6 281 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 SS18L1O75177 396 aaPredicted RBP13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 OR5H8P0DN80 308 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 AKR1C2P52895 323 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 AKR1C1Q04828 323 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 CLN3Q13286 438 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 TMEM68Q96MH6 324 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 RNF126Q9BV68 326 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 ASCL3Q9NQ33 180 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 HSF4Q9ULV5 492 aa13.05□□□□□ -0.32
SCAMP4-202ENST00000409472 PRR14LQ5THK1 2151 aa13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 A0A1B0GV90 55 aa13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 MSGN1A6NI15 193 aa13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 OR7C1O76099 320 aaPredicted RBP13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 HOXB5P09067 269 aa13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 TAS2R60P59551 318 aa13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 RAB4BP61018 213 aa13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 RNPS1Q15287 305 aaKnown RBP13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 SPATA46Q5T0L3 261 aa13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 SLC22A25Q6T423 547 aa13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 MRPL21Q7Z2W9 205 aaKnown RBP13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 GCNT2Q8N0V5 402 aa13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 FDCSPQ8NFU4 85 aa13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 TOMM40LQ969M1 308 aa13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 CPNE2Q96FN4 548 aaPredicted RBP13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 ZNF471Q9BX82 626 aaPredicted RBP13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 OR5AC2Q9NZP5 309 aa13.04□□□□□ -0.32
SCAMP4-202ENST00000409472 SLC22A20A6NK97 555 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 SLC31A2O15432 143 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 ACTL6AO96019 429 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 ZNF44P15621 663 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 MUC1P15941 1255 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 TNFSF10P50591 281 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 PPT1P50897 306 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 CCL11P51671 97 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 SPCS3P61009 180 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 ZDHHC11Q9H8X9 412 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 TREM1Q9NP99 234 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 IL36GQ9NZH8 169 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 ZFHX2Q9C0A1 2572 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 RRP8O43159 456 aaKnown RBP13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 CELA3BP08861 270 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 GLI4P10075 376 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 ZNF14P17017 642 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 PSMB6P28072 239 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 FXYD4P59646 89 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 ARL6IP1Q15041 203 aa13.03□□□□□ -0.32
SCAMP4-202ENST00000409472 PPA1Q15181 289 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms