RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 H3BML4 177 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 IGHG1P01857 330 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 RPL23AP62750 156 aaKnown RBP13.42□□□□□ -0.26
LIMS2-205ENST00000409455 GRB2P62993 217 aaKnown RBP13.42□□□□□ -0.26
LIMS2-205ENST00000409455 MSI2Q96DH6 328 aaKnown RBP13.42□□□□□ -0.26
LIMS2-205ENST00000409455 SNX22Q96L94 193 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 PITPNC1Q9UKF7 332 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 RFNGQ9Y644 331 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 ADAMTS20P59510 1910 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 A0A1W2PNV4 684 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 FAM24AA6NFZ4 105 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 PHF1O43189 567 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-205ENST00000409455 NKAIN1Q4KMZ8 207 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 CRIP3Q6Q6R5 217 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 OR4D5Q8NGN0 318 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 LIN37Q96GY3 246 aaPredicted RBP13.42□□□□□ -0.26
LIMS2-205ENST00000409455 PGAM5Q96HS1 289 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 SLC7A11Q9UPY5 501 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 VDAC3Q9Y277 283 aa13.42□□□□□ -0.26
LIMS2-205ENST00000409455 ANKUB1A6NFN9 424 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 LIPT2A6NK58 231 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 VSTM2BA6NLU5 285 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 C9J4A7 227 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 PHOX2AO14813 284 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 TCAPO15273 167 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 HBE1P02100 147 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 OMGP23515 440 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 DUSP3P51452 185 aaPredicted RBP13.41□□□□□ -0.26
LIMS2-205ENST00000409455 TLE4Q04727 773 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 LANCL3Q6ZV70 420 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 TGIF2LXQ8IUE1 241 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 UEVLDQ8IX04 471 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 HAS2Q92819 552 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 GNPNAT1Q96EK6 184 aaPredicted RBP13.41□□□□□ -0.26
LIMS2-205ENST00000409455 NOL4LQ96MY1 436 aaPredicted RBP13.41□□□□□ -0.26
LIMS2-205ENST00000409455 PNRC2Q9NPJ4 139 aaKnown RBP13.41□□□□□ -0.26
LIMS2-205ENST00000409455 NTN3O00634 580 aaPredicted RBP13.41□□□□□ -0.26
LIMS2-205ENST00000409455 ZNF205O95201 554 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 DBHP09172 617 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 RRADP55042 308 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 H3F3AP84243 136 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 TAF9Q16594 264 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 SLC35G3Q8N808 338 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 CLDND2Q8NHS1 167 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 PP6455Q8WZ26 134 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 RAB24Q969Q5 203 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 Q96M66 194 aa13.41□□□□□ -0.26
LIMS2-205ENST00000409455 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 IGSF23A1L1A6 192 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 C2orf72A6NCS6 295 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 A8MWP6 167 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 CLDN34H7C241 214 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 PGA4P0DJD7 388 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 PGA3P0DJD8 388 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 OPRM1P35372 400 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 CEACAM6P40199 344 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 PNRC1Q12796 327 aaPredicted RBP13.4□□□□□ -0.26
LIMS2-205ENST00000409455 JOSD1Q15040 202 aaPredicted RBP13.4□□□□□ -0.26
LIMS2-205ENST00000409455 MEX3BQ6ZN04 569 aaKnown RBP13.4□□□□□ -0.26
LIMS2-205ENST00000409455 P4HA3Q7Z4N8 544 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 OR1N1Q8NGS0 311 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 PIGTQ969N2 578 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 RCC1LQ96I51 464 aaKnown RBP13.4□□□□□ -0.26
LIMS2-205ENST00000409455 NEU1Q99519 415 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 PLEKHF2Q9H8W4 249 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 TMEM242Q9NWH2 141 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 B3GAT1Q9P2W7 334 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 DKKL1Q9UK85 242 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 DVL1O14640 695 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 FAHP16930 419 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 DTYMKP23919 212 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 CD200P41217 278 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 MFAP5Q13361 173 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 OR8G1Q15617 311 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 CARD17Q5XLA6 110 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 CCDC71LQ8N9Z2 235 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 FAAP24Q9BTP7 215 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 R4GN57 208 aa13.4□□□□□ -0.26
LIMS2-205ENST00000409455 IGLV3-12A0A075B6K2 115 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 IGHV3-20A0A0C4DH32 117 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 DHRS3O75911 302 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 CDS2O95674 445 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 PGA5P0DJD9 388 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 NKX2-1P43699 371 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-205ENST00000409455 FOXF1Q12946 379 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 TMEM183AQ8IXX5 376 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 OR10G4Q8NGN3 311 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 OR5C1Q8NGR4 320 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 TMEM171Q8WVE6 324 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 ANGPTL4Q9BY76 406 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 AKIRIN1Q9H9L7 192 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-205ENST00000409455 LNP1A1A4G5 178 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 ZNF732B4DXR9 585 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 E9PLN8 166 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 MSTNO14793 375 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 ATXN7O15265 892 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-205ENST00000409455 FUT3P21217 361 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 NOVA1P51513 510 aaKnown RBP13.39□□□□□ -0.27
LIMS2-205ENST00000409455 RND2P52198 227 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 VAMP2P63027 116 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms