RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 KCNIP3Q9Y2W7 256 aa11.62□□□□□ -0.55
COL6A2-204ENST00000409416 DBX1A6NMT0 343 aa11.62□□□□□ -0.55
COL6A2-204ENST00000409416 DHRS3O75911 302 aa11.62□□□□□ -0.55
COL6A2-204ENST00000409416 LYZL2Q7Z4W2 148 aa11.62□□□□□ -0.55
COL6A2-204ENST00000409416 OR1F12Q8NHA8 337 aa11.62□□□□□ -0.55
COL6A2-204ENST00000409416 ZFP57Q9NU63 452 aa11.62□□□□□ -0.55
COL6A2-204ENST00000409416 AK3Q9UIJ7 227 aa11.62□□□□□ -0.55
COL6A2-204ENST00000409416 HDGFL3Q9Y3E1 203 aa11.62□□□□□ -0.55
COL6A2-204ENST00000409416 ADGRG4Q8IZF6 3080 aa11.62□□□□□ -0.55
COL6A2-204ENST00000409416 A0A1W2PNV4 684 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 ZNF587BE7ETH6 402 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 OR5AC1P0C628 307 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 ZNF728P0DKX0 622 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 CEBPDP49716 269 aaPredicted RBP11.61□□□□□ -0.55
COL6A2-204ENST00000409416 MALLQ13021 153 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 FAM189A2Q15884 450 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 PNLIPRP3Q17RR3 467 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 CLEC12BQ2HXU8 276 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 AVPI1Q5T686 147 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 OR10AD1Q8NGE0 317 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 RGCCQ9H4X1 137 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 PPP1R3CQ9UQK1 317 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 FBXO7Q9Y3I1 522 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 LY6G6EA0A0G2JKS1 128 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 ZNF732B4DXR9 585 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 WDR1O75083 606 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 HGFACQ04756 655 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 SRSF4Q08170 494 aaKnown RBP11.61□□□□□ -0.55
COL6A2-204ENST00000409416 EDDM3AQ14507 147 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 POC1AQ8NBT0 407 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 CPT1CQ8TCG5 803 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 BSCL2Q96G97 398 aaPredicted RBP11.61□□□□□ -0.55
COL6A2-204ENST00000409416 OCSTAMPQ9BR26 566 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 PNRC2Q9NPJ4 139 aaKnown RBP11.61□□□□□ -0.55
COL6A2-204ENST00000409416 U3KQA8 63 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 OR13C7P0DN81 318 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 HKR1P10072 659 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 NR2C1P13056 603 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 SELLP14151 372 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 ZNF708P17019 499 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 EXT1Q16394 746 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 DEFB124Q8NES8 71 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 RTN4IP1Q8WWV3 396 aaPredicted RBP11.61□□□□□ -0.55
COL6A2-204ENST00000409416 ERGIC1Q969X5 290 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 RHOVQ96L33 236 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 LURAP1Q96LR2 239 aa11.61□□□□□ -0.55
COL6A2-204ENST00000409416 DEFB108AA8MXU0 73 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 EIF1BO60739 113 aaKnown RBP11.6□□□□□ -0.55
COL6A2-204ENST00000409416 HOXB1P14653 301 aaPredicted RBP11.6□□□□□ -0.55
COL6A2-204ENST00000409416 F2RL1P55085 397 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 Q0VFX4 171 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 CALHM1Q8IU99 346 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 OR2V1Q8NHB1 315 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 SLC25A43Q8WUT9 341 aaPredicted RBP11.6□□□□□ -0.55
COL6A2-204ENST00000409416 PRRX2Q99811 253 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 CHRNA10Q9GZZ6 450 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 OSGIN2Q9Y236 505 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 URGCP-MRPS24S4R325 110 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 CREBBPQ92793 2442 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 C1orf196B1AJZ1 125 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 F8VVB4 439 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 F8VWA3 439 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 ATXN7O15265 892 aaPredicted RBP11.6□□□□□ -0.55
COL6A2-204ENST00000409416 FGF16O43320 207 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 GSK3AP49840 483 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 VAMP2P63027 116 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 MIDNQ504T8 468 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 FAM213BQ8TBF2 198 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 HS3ST6Q96QI5 342 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 CLCC1Q96S66 551 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 CNTNAP3Q9BZ76 1288 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 UNKLQ9H9P5 680 aaKnown RBP11.6□□□□□ -0.55
COL6A2-204ENST00000409416 COA4Q9NYJ1 87 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 PRSS50Q9UI38 385 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 C9JQL5 133 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 FAM157CP0CG43 387 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 ZNF14P17017 642 aaPredicted RBP11.6□□□□□ -0.55
COL6A2-204ENST00000409416 ENDOGQ14249 297 aaKnown RBP11.6□□□□□ -0.55
COL6A2-204ENST00000409416 HES3Q5TGS1 186 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 TMEM268Q5VZI3 342 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 DPPA2Q7Z7J5 298 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 KIRREL1Q96J84 757 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 MEGF10Q96KG7 1140 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 OBP2BQ9NPH6 170 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 ABI3Q9P2A4 366 aa11.6□□□□□ -0.55
COL6A2-204ENST00000409416 MED12LQ86YW9 2145 aa11.59□□□□□ -0.55
COL6A2-204ENST00000409416 SERPINE3A8MV23 424 aa11.59□□□□□ -0.55
COL6A2-204ENST00000409416 NKX2-8O15522 239 aa11.59□□□□□ -0.55
COL6A2-204ENST00000409416 S100PP25815 95 aa11.59□□□□□ -0.55
COL6A2-204ENST00000409416 RAB5BP61020 215 aa11.59□□□□□ -0.55
COL6A2-204ENST00000409416 SSTP61278 116 aa11.59□□□□□ -0.55
COL6A2-204ENST00000409416 ERVS71-1P61550 626 aa11.59□□□□□ -0.55
COL6A2-204ENST00000409416 MST1LQ2TV78 715 aa11.59□□□□□ -0.55
COL6A2-204ENST00000409416 ZFP62Q8NB50 900 aaPredicted RBP11.59□□□□□ -0.55
COL6A2-204ENST00000409416 DEFB108BQ8NET1 73 aa11.59□□□□□ -0.55
COL6A2-204ENST00000409416 HINT2Q9BX68 163 aa11.59□□□□□ -0.55
COL6A2-204ENST00000409416 SPACA1Q9HBV2 294 aa11.59□□□□□ -0.55
COL6A2-204ENST00000409416 ANXA10Q9UJ72 324 aa11.59□□□□□ -0.55
COL6A2-204ENST00000409416 IGHV3-43A0A0B4J1X8 118 aa11.59□□□□□ -0.55
COL6A2-204ENST00000409416 ACAA1P09110 424 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms