RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 ZNF71Q9NQZ8 489 aaPredicted RBP13.74□□□□□ -0.21
CCDC85A-201ENST00000407595 FZR1Q9UM11 496 aa13.74□□□□□ -0.21
CCDC85A-201ENST00000407595 CARHSP1Q9Y2V2 147 aaKnown RBP13.74□□□□□ -0.21
CCDC85A-201ENST00000407595 ATRXP46100 2492 aa13.74□□□□□ -0.21
CCDC85A-201ENST00000407595 RFPL3SP0C7P2 107 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 POLR2GP62487 172 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 THNSL2Q86YJ6 484 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 TUSC5Q8IXB3 177 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 ZNF610Q8N9Z0 462 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 ADAMTS17Q8TE56 1095 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 FAM131CQ96AQ9 280 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 PARP11Q9NR21 331 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 STRAPQ9Y3F4 350 aaKnown RBP13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 TIMM10BQ9Y5J6 103 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 LIPGQ9Y5X9 500 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 ACACBO00763 2458 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 CREBBPQ92793 2442 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 CYTIPO60759 359 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 LYZL6O75951 148 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 FSTP19883 344 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 PCOLCEQ15113 449 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 ALKBH6Q3KRA9 238 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 TEX30Q5JUR7 227 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 RTN4RL2Q86UN3 420 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 CXorf67Q86X51 503 aaPredicted RBP13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 MRPL41Q8IXM3 137 aaKnown RBP13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 DYRK2Q92630 601 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 WSB1Q9Y6I7 421 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 ZNF705FA8MVS1 300 aaPredicted RBP13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 NDUFA2O43678 99 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 ZNF705DP0CH99 300 aaPredicted RBP13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 ZNF705BP0CI00 300 aaPredicted RBP13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 LIFP15018 202 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 ZNF383Q8NA42 475 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 LRRC75AQ8NAA5 344 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 FAM173AQ9BQD7 235 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 MOB1AQ9H8S9 216 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 G6PC2Q9NQR9 355 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 IGHV1-45A0A0A0MS14 117 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 DXOO77932 396 aaKnown RBP13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 ZNF766Q5HY98 468 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 BIVMQ86UB2 503 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 RBMXL1Q96E39 390 aaKnown RBP13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 PECRQ9BY49 303 aa13.73□□□□□ -0.21
CCDC85A-201ENST00000407595 TRGV5A0A0B4J1U4 118 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 A0A0G2JMM0 328 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 A0A1W2PPB8 328 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 A0A1W2PRS3 328 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 KIR3DP1A8MWS1 328 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 GPR137BO60478 399 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 NRASP01111 189 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 FGF5P12034 268 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 ZNF133P52736 654 aaPredicted RBP13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 ELLP55199 621 aaPredicted RBP13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 FBXL14Q8N1E6 418 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 PLPPR2Q96GM1 343 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 COL4A3Q01955 1670 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 IFNA1P01562 189 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 HKR1P10072 659 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 MDKP21741 143 aaPredicted RBP13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 GCH1P30793 250 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 SOX8P57073 446 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 SELENOVP59797 346 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 LINC00469Q8N7U9 141 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 MED13Q9UHV7 2174 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 ECI1P42126 302 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 RBP2P50120 134 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 PTX4Q96A99 478 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 CABLES2Q9BTV7 478 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 ST3GAL6Q9Y274 331 aa13.72□□□□□ -0.21
CCDC85A-201ENST00000407595 SLC22A20A6NK97 555 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 CD300LBA8K4G0 201 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 SRD5A2P31213 254 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 OR2B11Q5JQS5 317 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 ZNF709Q8N972 641 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 OR51M1Q9H341 326 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 PLK3Q9H4B4 646 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 SLC2A8Q9NY64 477 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 COX6A1P12074 109 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 HAAOP46952 286 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 GABRA2P47869 451 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 TIPARPQ7Z3E1 657 aaKnown RBP13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 OR5C1Q8NGR4 320 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 MEGF10Q96KG7 1140 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 AQP10Q96PS8 301 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 HINT2Q9BX68 163 aa13.71□□□□□ -0.21
CCDC85A-201ENST00000407595 HBE1P02100 147 aa13.71□□□□□ -0.22
CCDC85A-201ENST00000407595 MLF1P58340 268 aa13.71□□□□□ -0.22
CCDC85A-201ENST00000407595 C1orf87Q8N0U7 546 aa13.71□□□□□ -0.22
CCDC85A-201ENST00000407595 PSMF1Q92530 271 aa13.71□□□□□ -0.22
CCDC85A-201ENST00000407595 NINJ1Q92982 152 aa13.71□□□□□ -0.22
CCDC85A-201ENST00000407595 ERGIC1Q969X5 290 aa13.71□□□□□ -0.22
CCDC85A-201ENST00000407595 RHOVQ96L33 236 aa13.71□□□□□ -0.22
CCDC85A-201ENST00000407595 ZPBPQ9BS86 351 aa13.71□□□□□ -0.22
CCDC85A-201ENST00000407595 PLXNB3Q9ULL4 1909 aa13.71□□□□□ -0.22
CCDC85A-201ENST00000407595 SPTBN4Q9H254 2564 aa13.7□□□□□ -0.22
CCDC85A-201ENST00000407595 ZGRF1Q86YA3 2104 aa13.7□□□□□ -0.22
CCDC85A-201ENST00000407595 DOPEY2Q9Y3R5 2298 aa13.7□□□□□ -0.22
CCDC85A-201ENST00000407595 RAC3P60763 192 aa13.7□□□□□ -0.22
CCDC85A-201ENST00000407595 ZNF528Q3MIS6 628 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms