RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 MED19A0JLT2 244 aaPredicted RBP8.44□□□□□ -1.06
MSH2-202ENST00000406134 IGSF23A1L1A6 192 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 GJE1A6NN92 205 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 E5RGE8 158 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 K7N7A8 449 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 PPYP01298 95 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 CFIP05156 583 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 EPHA1P21709 976 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 GUCA1AP43080 201 aaPredicted RBP8.44□□□□□ -1.06
MSH2-202ENST00000406134 MIDNQ504T8 468 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 ZNF818PQ6ZRF7 136 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 RAB11FIP2Q7L804 512 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 SIGLEC12Q96PQ1 595 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 CLCC1Q96S66 551 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 REPIN1Q9BWE0 567 aaKnown RBP8.44□□□□□ -1.06
MSH2-202ENST00000406134 HES7Q9BYE0 225 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 PLEKHA2Q9HB19 425 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 MEMO1Q9Y316 297 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 NSG2Q9Y328 171 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 SCGB1D2O95969 90 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 CCL2P13500 99 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 CLDN18P56856 261 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 TMEM211Q6ICI0 200 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 CT55Q8WUE5 264 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 ABHD14AQ9BUJ0 271 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 SUCNR1Q9BXA5 334 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 BCO1Q9HAY6 547 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 PLSCR2Q9NRY7 297 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 GLRX2Q9NS18 164 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 SLC7A10Q9NS82 523 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 MTCH1Q9NZJ7 389 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 ZNF391Q9UJN7 358 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 ZNF816-ZNF321PA0A0X1KG74 233 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 NME2P1O60361 137 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 GPR137BO60478 399 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 IGLV2-14P01704 120 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 SEC11BP0C7V7 166 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 TCN2P20062 427 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 PVALBP20472 110 aaPredicted RBP8.44□□□□□ -1.06
MSH2-202ENST00000406134 AKR1C3P42330 323 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 ASCL1P50553 236 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 IGFBP7Q16270 282 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 Q3ZCU0 254 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 ACER2Q5QJU3 275 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 PLCXD3Q63HM9 321 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 SPINK14Q6IE38 97 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 TMEM56Q96MV1 263 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 IP6K3Q96PC2 410 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 RGCCQ9H4X1 137 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 ZNF703Q9H7S9 590 aaPredicted RBP8.44□□□□□ -1.06
MSH2-202ENST00000406134 POMT1Q9Y6A1 747 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 TMEM56-RWDD3S4R434 201 aa8.44□□□□□ -1.06
MSH2-202ENST00000406134 CHD3Q12873 2000 aaKnown RBP8.44□□□□□ -1.06
MSH2-202ENST00000406134 NKX2-6A6NCS4 301 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 C9J4A7 227 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 RPL36A-HNRNPH2H7BZ11 118 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 TUSC2O75896 110 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 SCTP09683 121 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 HOXA1P49639 335 aaPredicted RBP8.43□□□□□ -1.06
MSH2-202ENST00000406134 PIGCQ92535 297 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 Q9N2K0 584 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 CLEC18AA5D8T8 446 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 KIAA1324LA8MWY0 1029 aaPredicted RBP8.43□□□□□ -1.06
MSH2-202ENST00000406134 PROB1E7EW31 1015 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 PPP1CCP36873 323 aaKnown RBP8.43□□□□□ -1.06
MSH2-202ENST00000406134 S100A12P80511 92 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 NRN1LQ496H8 165 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 NMSQ5H8A3 153 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 SPSB3Q6PJ21 355 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 PCSK4Q6UW60 755 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 SLC25A26Q70HW3 274 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 GVINP1Q7Z2Y8 2422 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 CLEC18CQ8NCF0 446 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 TMEM222Q9H0R3 208 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 A0A0G2JRQ6 117 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 A0A1W2PPE3 182 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 B4E171 279 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 MPPED1O15442 326 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 SPINK2P20155 84 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 OTX2P32243 289 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 TSPAN7P41732 249 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 CCL20P78556 96 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 SRSF7Q16629 238 aaKnown RBP eCLIP8.43□□□□□ -1.06
MSH2-202ENST00000406134 DBX2Q6ZNG2 339 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 SELENOHQ8IZQ5 122 aaKnown RBP8.43□□□□□ -1.06
MSH2-202ENST00000406134 ZFP82Q8N141 532 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 C2CD4CQ8TF44 421 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 HIST1H2BAQ96A08 127 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 SLAMF9Q96A28 289 aa8.43□□□□□ -1.06
MSH2-202ENST00000406134 C3orf85A0A1B0GTC6 90 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 SLC22A20A6NK97 555 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 ZNF724A8MTY0 619 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 TRDCB7Z8K6 153 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 PHF1O43189 567 aaPredicted RBP8.42□□□□□ -1.06
MSH2-202ENST00000406134 P04436 131 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 ZNF44P15621 663 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 ACP1P24666 158 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 PAX9P55771 341 aa8.42□□□□□ -1.06
MSH2-202ENST00000406134 EWSR1Q01844 656 aaKnown RBP eCLIP8.42□□□□□ -1.06
MSH2-202ENST00000406134 IL13RA2Q14627 380 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms