RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ACSM5Q6NUN0 579 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 FAM122BQ7Z309 247 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 HDDC2Q7Z4H3 204 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 C11orf53Q8IXP5 236 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 C8orf59Q8N0T1 100 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 GPR137CQ8N3F9 429 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 ARIH2OSQ8N7S6 290 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR8D4Q8NGM9 314 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR5M1Q8NGP8 315 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR51A7Q8NH64 312 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR10D3Q8NH80 312 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 CNIH3Q8TBE1 160 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 FAM81AQ8TBF8 368 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 Q96MT0 163 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 OXGR1Q96P68 337 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 SLC38A2Q96QD8 506 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 MRPL13Q9BYD1 178 aaKnown RBP3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 PLA2G12AQ9BZM1 189 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 DEFB127Q9H1M4 99 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 TXNIPQ9H3M7 391 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 TMEM185BQ9H7F4 350 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 CMC2Q9NRP2 79 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 INIPQ9NRY2 104 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 RDH8Q9NYR8 311 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 TAS2R5Q9NYW4 299 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 KLHL21Q9UJP4 597 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 SPTBN1Q01082 2364 aaKnown RBP3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZZEF1O43149 2961 aa3.6□□□□□ -1.83
HMGB3P19-201ENST00000403971 A0A1W2PRG6 482 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 SNTNA6NMZ2 147 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 RIIAD1A6NNX1 92 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 GPR171O14626 319 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 TNFSF11O14788 317 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 RNF13O43567 381 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 TRAF3IP2O43734 574 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 CXCL13O43927 109 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 MRPS14O60783 128 aaKnown RBP3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 WBP4O75554 376 aaKnown RBP3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 GNAO1P09471 354 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 NR2C1P13056 603 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 GABRA1P14867 456 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF3P17036 446 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF43P17038 809 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 PTNP21246 168 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 STARP49675 285 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 TDGF1P3P51864 188 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 BLVRAP53004 296 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 IL5RAQ01344 420 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 MAD2L1BPQ15013 274 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 NADK2Q4G0N4 442 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 CLEC12AQ5QGZ9 265 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 NXNL2Q5VZ03 156 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 TMEM236Q5W0B7 351 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 HBMQ6B0K9 141 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 UGT2A3Q6UWM9 527 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 Q6ZPB1 254 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 SLC35D2Q76EJ3 337 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 GID4Q8IVV7 300 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 ENTHD1Q8IYW4 607 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 ATP6V1C2Q8NEY4 427 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR5AU1Q8NGC0 362 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 OR13F1Q8NGS4 319 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 TMEM80Q96HE8 168 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 PLEKHA8Q96JA3 519 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 CNBD2Q96M20 576 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 NOL4LQ96MY1 436 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 ERMAPQ96PL5 475 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 ALG12Q9BV10 488 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 EXO5Q9H790 373 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 GLRX2Q9NS18 164 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 CLN6Q9NWW5 311 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 ZNF226Q9NYT6 803 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 TVP23BQ9NYZ1 205 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 UBAP1Q9NZ09 502 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 SPRR3Q9UBC9 169 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 BLOC1S6Q9UL45 172 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 MCTS1Q9ULC4 181 aaKnown RBP3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 NPIPA1Q9UND3 350 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 RNF6Q9Y252 685 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 IER3IP1Q9Y5U9 82 aa3.59□□□□□ -1.83
HMGB3P19-201ENST00000403971 PRR14LQ5THK1 2151 aa3.59□□□□□ -1.84
HMGB3P19-201ENST00000403971 EPG5Q9HCE0 2579 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 SPENQ96T58 3664 aaKnown RBP3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 IRGMA1A4Y4 181 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 PRSS37A4D1T9 235 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 OR6C65A6NJZ3 312 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF726A6NNF4 738 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF716A6NP11 495 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 E9PLD3 99 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 H0YC42 278 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 XKRYO14609 159 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 PRKYO43930 277 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF254O75437 659 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 TNFAIP8O95379 198 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 CLIC3O95833 236 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 OPN1LWP04000 364 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 CRHP06850 196 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 CALCBP10092 127 aa3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 PIPP12273 146 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P19-201ENST00000403971 HIST1H1CP16403 213 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms