RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PHF1O43189 567 aaPredicted RBP17.13■□□□□ 0.33
CCDC47-202ENST00000403162 LIFP15018 202 aa17.13■□□□□ 0.33
CCDC47-202ENST00000403162 DSCR4P56555 118 aaPredicted RBP17.13■□□□□ 0.33
CCDC47-202ENST00000403162 EWSR1Q01844 656 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCDC47-202ENST00000403162 GNMTQ14749 295 aa17.13■□□□□ 0.33
CCDC47-202ENST00000403162 PCOLCEQ15113 449 aa17.13■□□□□ 0.33
CCDC47-202ENST00000403162 PIGYQ3MUY2 71 aa17.13■□□□□ 0.33
CCDC47-202ENST00000403162 RAET1LQ5VY80 246 aa17.13■□□□□ 0.33
CCDC47-202ENST00000403162 GPR137CQ8N3F9 429 aa17.13■□□□□ 0.33
CCDC47-202ENST00000403162 FAM24BQ8N5W8 94 aa17.13■□□□□ 0.33
CCDC47-202ENST00000403162 OR11L1Q8NGX0 322 aa17.13■□□□□ 0.33
CCDC47-202ENST00000403162 CNOT1A5YKK6 2376 aaKnown RBP17.13■□□□□ 0.33
CCDC47-202ENST00000403162 WDFY3Q8IZQ1 3526 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 IGKV1-12A0A0C4DH73 117 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 IGKV1D-12P01611 117 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 PPP1CCP36873 323 aaKnown RBP17.12■□□□□ 0.33
CCDC47-202ENST00000403162 TMEM182Q6ZP80 229 aaPredicted RBP17.12■□□□□ 0.33
CCDC47-202ENST00000403162 SLC35G3Q8N808 338 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 CD300LFQ8TDQ1 290 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 SPRY4Q9C004 299 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 PTRH2Q9Y3E5 179 aaKnown RBP17.12■□□□□ 0.33
CCDC47-202ENST00000403162 ZIC3O60481 467 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 CDS2O95674 445 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 CST2P09228 141 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 OR8U8P0C7N1 319 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 KRTAP27-1Q3LI81 207 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 C1QL4Q86Z23 238 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 LURAP1LQ8IV03 231 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 FBXL14Q8N1E6 418 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 OR8G5Q8NG78 346 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 OR1F12Q8NHA8 337 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 FAM213BQ8TBF2 198 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 NIT2Q9NQR4 276 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 ZNF391Q9UJN7 358 aa17.12■□□□□ 0.33
CCDC47-202ENST00000403162 CEP250Q9BV73 2442 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 A0A1W2PPE2 198 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 FAM221AA4D161 298 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 PDCD6O75340 191 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 NRASP01111 189 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 ARG1P05089 322 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 GLI4P10075 376 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 HERV-K104P61576 105 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 SRPXP78539 464 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 ZNF100Q8IYN0 542 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 CT55Q8WUE5 264 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 YPEL4Q96NS1 127 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 TP53RKQ96S44 253 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 AP4M1O00189 453 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 TCN2P20062 427 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 AADACP22760 399 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 ZNF266Q14584 549 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 TMEM211Q6ICI0 200 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 ZNF774Q6NX45 483 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 BRICD5Q6PL45 260 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 TMPRSS7Q7RTY8 843 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 OR2C3Q8N628 320 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 PROK2Q9HC23 129 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 ST3GAL6Q9Y274 331 aa17.11■□□□□ 0.33
CCDC47-202ENST00000403162 LOC102723996A0A087X1L8 192 aa17.1■□□□□ 0.33
CCDC47-202ENST00000403162 OR6C6A6NF89 314 aa17.1■□□□□ 0.33
CCDC47-202ENST00000403162 PITX3O75364 302 aa17.1■□□□□ 0.33
CCDC47-202ENST00000403162 LCATP04180 440 aa17.1■□□□□ 0.33
CCDC47-202ENST00000403162 OR13C7P0DN81 318 aa17.1■□□□□ 0.33
CCDC47-202ENST00000403162 CCL3P10147 92 aa17.1■□□□□ 0.33
CCDC47-202ENST00000403162 MALLQ13021 153 aa17.1■□□□□ 0.33
CCDC47-202ENST00000403162 ADAM5Q6NVV9 412 aa17.1■□□□□ 0.33
CCDC47-202ENST00000403162 FAM185AQ8N0U4 392 aa17.1■□□□□ 0.33
CCDC47-202ENST00000403162 ZNF565Q8N9K5 539 aa17.1■□□□□ 0.33
CCDC47-202ENST00000403162 TCTEX1D2Q8WW35 142 aa17.1■□□□□ 0.33
CCDC47-202ENST00000403162 SF3B5Q9BWJ5 86 aaKnown RBP17.1■□□□□ 0.33
CCDC47-202ENST00000403162 OR51M1Q9H341 326 aa17.1■□□□□ 0.33
CCDC47-202ENST00000403162 A0A0J9YW62 118 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 C3orf85A0A1B0GTC6 90 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 KLF7O75840 302 aaPredicted RBP17.09■□□□□ 0.33
CCDC47-202ENST00000403162 FUT6P51993 359 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 RPS23P62266 143 aaKnown RBP17.09■□□□□ 0.33
CCDC47-202ENST00000403162 SOHLH1Q5JUK2 328 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 Q6ZPA2 131 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 SUMF2Q8NBJ7 301 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 PLSCR2Q9NRY7 297 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 ZMAT5Q9UDW3 170 aaKnown RBP17.09■□□□□ 0.33
CCDC47-202ENST00000403162 DKKL1Q9UK85 242 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 SDK2Q58EX2 2172 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 TRDCB7Z8K6 153 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 TNFSF11O14788 317 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 MPPED1O15442 326 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 PPYP01298 95 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 UMODP07911 640 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 CELA2AP08217 269 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 EIF2S3P41091 472 aaKnown RBP17.09■□□□□ 0.33
CCDC47-202ENST00000403162 FOLR3P41439 243 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 RAC1P63000 192 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 EXT1Q16394 746 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 OR2Y1Q8NGV0 311 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 SRXN1Q9BYN0 137 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 TMEM222Q9H0R3 208 aa17.09■□□□□ 0.33
CCDC47-202ENST00000403162 DNPH1O43598 174 aa17.08■□□□□ 0.33
CCDC47-202ENST00000403162 IFNA17P01571 189 aa17.08■□□□□ 0.33
CCDC47-202ENST00000403162 NQO2P16083 231 aa17.08■□□□□ 0.33
CCDC47-202ENST00000403162 RBM11P57052 281 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms