RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ISL1P61371 349 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 ZNF85Q03923 595 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 SCN1BQ07699 218 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 PDZK1IP1Q13113 114 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 DIAPH2-AS1Q14236 149 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 FLOT2Q14254 428 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 KPNB1Q14974 876 aaKnown RBP9.42□□□□□ -0.9
LINC00544-201ENST00000400540 TP53I3Q53FA7 332 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 KRBOX4Q5JUW0 171 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 C5orf56Q8N8D9 126 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 KLHL30-AS1Q8NEE0 82 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 DNAAF1Q8NEP3 725 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 PP6455Q8WZ26 134 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 TFAP2CQ92754 450 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 LEAP2Q969E1 77 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 UTP4Q969X6 686 aaKnown RBP9.42□□□□□ -0.9
LINC00544-201ENST00000400540 NRBF2Q96F24 287 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 P2RX4Q99571 388 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 GPR61Q9BZJ8 451 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 GLS2Q9UI32 602 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 GNG8Q9UK08 70 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 PCDHGB5Q9Y5G0 923 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 STARD9Q9P2P6 4700 aa9.42□□□□□ -0.9
LINC00544-201ENST00000400540 A0A087X0M5 115 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 A0A1B0GX30 115 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 A0A1W2PPI3 338 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 FAM90A18PA6NE21 464 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 FAM90A16PA6NEW6 464 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 FAM90A20PA6NIJ5 464 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 FAM90A9PA6NNJ1 464 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 FAM90A12PA8MX19 464 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 FAM90A5PA8MXJ8 464 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 M0QZK8 103 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 SLC33A1O00400 549 aaPredicted RBP9.41□□□□□ -0.9
LINC00544-201ENST00000400540 SH2D1BO14796 132 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 KDM4BO94953 1096 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 OR2T7P0C7T2 308 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 FAM90A15PP0C7V4 464 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 FAM90A13PP0C7W8 464 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 FAM90A14PP0C7W9 464 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 FAM90A24PP0C7X0 464 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 UBCP0CG48 685 aaKnown RBP9.41□□□□□ -0.9
LINC00544-201ENST00000400540 ZNF44P15621 663 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 LMO1P25800 156 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 MNDAP41218 407 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 NKAPLQ5M9Q1 402 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 CCDC144NLQ6NUI1 221 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 Q6P435 159 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 LHFPL2Q6ZUX7 228 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 CCDC54Q8NEL0 328 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 OR4D6Q8NGJ1 314 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 OR10AC1Q8NH08 325 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 TOMM40LQ969M1 308 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 FGGYQ96C11 551 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 C10orf35Q96D05 121 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 KIRREL1Q96J84 757 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 OPALINQ96PE5 141 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 COMMD4Q9H0A8 199 aa9.41□□□□□ -0.9
LINC00544-201ENST00000400540 WARS2Q9UGM6 360 aaKnown RBP9.41□□□□□ -0.9
LINC00544-201ENST00000400540 LINC01548A6NM66 108 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 ZNF729A6NN14 1252 aaPredicted RBP9.4□□□□□ -0.9
LINC00544-201ENST00000400540 SERPINE3A8MV23 424 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 HSPB6O14558 160 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 ATP8B1O43520 1251 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 SULT1C4O75897 302 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 FAM107AO95990 144 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 CSN2P05814 226 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 FAM106CPP0CH98 169 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 ZNF20P17024 532 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 TMEM11P17152 192 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 HOXB6P17509 224 aaKnown RBP9.4□□□□□ -0.9
LINC00544-201ENST00000400540 HTR1FP30939 366 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 POLR2IP36954 125 aaKnown RBP9.4□□□□□ -0.9
LINC00544-201ENST00000400540 MYCNOSP40205 109 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 GLP1RP43220 463 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 LUMP51884 338 aaPredicted RBP9.4□□□□□ -0.9
LINC00544-201ENST00000400540 PRRX1P54821 245 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 RAB25P57735 213 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 NANOS3P60323 173 aaKnown RBP9.4□□□□□ -0.9
LINC00544-201ENST00000400540 DGCR2P98153 550 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 HNF4GQ14541 408 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 DEFB136Q30KP8 78 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 UTS2BQ765I0 119 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 DRAM1Q8N682 238 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 OR51A4Q8NGJ6 313 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 CHPT1Q8WUD6 406 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 RPEQ96AT9 228 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 CREB3L1Q96BA8 519 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 RAX2Q96IS3 184 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 PRR25Q96S07 402 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 MCRIP2Q9BUT9 160 aaKnown RBP9.4□□□□□ -0.9
LINC00544-201ENST00000400540 POMPQ9Y244 141 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 U3KQK5 164 aa9.4□□□□□ -0.9
LINC00544-201ENST00000400540 FUOMA2VDF0 154 aa9.39□□□□□ -0.91
LINC00544-201ENST00000400540 OOSP1A8MZH6 123 aa9.39□□□□□ -0.91
LINC00544-201ENST00000400540 PRKACBP22694 351 aa9.39□□□□□ -0.91
LINC00544-201ENST00000400540 GNG10P50151 68 aa9.39□□□□□ -0.91
LINC00544-201ENST00000400540 HES1Q14469 280 aa9.39□□□□□ -0.91
LINC00544-201ENST00000400540 CDK5R1Q15078 307 aa9.39□□□□□ -0.91
LINC00544-201ENST00000400540 LTC4SQ16873 150 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms