RNA–Protein interactions for RNA: ENST00000399591.5

CACNA1C-205, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-205ENST00000399591 TMEM202A6NGA9 273 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 KLF3P57682 345 aaPredicted RBP9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 EGR3Q06889 387 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 TPBGQ13641 420 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 NUFIP2Q7Z417 695 aaKnown RBP9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 ZDHHC23Q8IYP9 409 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 LRRC15Q8TF66 581 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 NUDT8Q8WV74 236 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 GNRHR2Q96P88 292 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 LINC00470Q9BZP3 86 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 SDK1Q7Z5N4 2213 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 IGSF23A1L1A6 192 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 HSPB2A8KAH6 182 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 HSPB2Q16082 182 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 NHLRC1Q6VVB1 395 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 RTN4RL1Q86UN2 441 aaPredicted RBP9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 OSR2Q8N2R0 312 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 FDCSPQ8NFU4 85 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 SLCO1C1Q9NYB5 712 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 OR2W1Q9Y3N9 320 aa9.98□□□□□ -0.81
CACNA1C-205ENST00000399591 C11orf94C9JXX5 98 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 TNFAIP6P98066 277 aaPredicted RBP9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 PYCR3Q53H96 274 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 DMRTA1Q5VZB9 504 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 C12orf54Q6X4T0 127 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 RNF165Q6ZSG1 346 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 PIANPQ8IYJ0 282 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 RNF133Q8WVZ7 376 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 CITED1Q99966 193 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 SOSTQ9BQB4 213 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 FOXJ2Q9P0K8 574 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 ERRFI1Q9UJM3 462 aaPredicted RBP9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 PPIL1Q9Y3C6 166 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 SOD3P08294 240 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 OR2V1Q8NHB1 315 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 CT55Q8WUE5 264 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 HSPB9Q9BQS6 159 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 DNAJB12Q9NXW2 375 aaKnown RBP9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 R4GMQ9 66 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 C3orf80F5H4A9 247 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 B3GALT4O96024 378 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 HOXC4P09017 264 aaPredicted RBP9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 PTGFRP43088 359 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 PNLIPRP3Q17RR3 467 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 CSF3RQ99062 836 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 C20orf27Q9GZN8 174 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 ASCL3Q9NQ33 180 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 TUBD1Q9UJT1 453 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 AMMECR1Q9Y4X0 333 aaPredicted RBP9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 C9orf170A2RU37 121 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 CLPSL1A2RUU4 121 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 HYAL3O43820 417 aaPredicted RBP9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 SFT2D2O95562 160 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 BRS3P32247 399 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 PAFAH1B2P68402 229 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 UBE2V2Q15819 145 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 STXBP6Q8NFX7 210 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 DDA1Q9BW61 102 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 ANXA10Q9UJ72 324 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 COX11Q9Y6N1 276 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 MFSD2BA6NFX1 497 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 PRRT4C9JH25 899 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 GJB3O75712 270 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 SBK3P0C264 359 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 TCHHQ07283 1943 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 TMEM196Q5HYL7 178 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 OR2C3Q8N628 320 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 LRRC75AQ8NAA5 344 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 TMEM56Q96MV1 263 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 CCL19Q99731 98 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 RASL11BQ9BPW5 248 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 SH2D2AQ9NP31 389 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 A4GNTQ9UNA3 340 aa9.97□□□□□ -0.81
CACNA1C-205ENST00000399591 ST8SIA5O15466 376 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 NKAIN4Q8IVV8 208 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 OR4P4Q8NGL7 312 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 LRRC61Q9BV99 259 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 ST3GAL6Q9Y274 331 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 SAA1P0DJI8 122 aaPredicted RBP9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 CDAP32320 146 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 ISL1P61371 349 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 PPP1CAP62136 330 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 ANKRD55Q3KP44 614 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 NSUN5P2Q63ZY6 315 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 ACSM5Q6NUN0 579 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 TMEM183AQ8IXX5 376 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 PHLDA1Q8WV24 401 aaPredicted RBP9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 TM4SF18Q96CE8 201 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 ORAI1Q96D31 301 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 S1PR5Q9H228 398 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 TAAR3PQ9P1P4 343 aa9.96□□□□□ -0.81
CACNA1C-205ENST00000399591 C4BP0C0L5 1744 aa9.96□□□□□ -0.82
CACNA1C-205ENST00000399591 IGHV4-39P01824 125 aa9.96□□□□□ -0.82
CACNA1C-205ENST00000399591 WNT1P04628 370 aa9.96□□□□□ -0.82
CACNA1C-205ENST00000399591 FGF2P09038 288 aa9.96□□□□□ -0.82
CACNA1C-205ENST00000399591 RPS4Y1P22090 263 aaKnown RBP9.96□□□□□ -0.82
CACNA1C-205ENST00000399591 EPHA8P29322 1005 aaPredicted RBP9.96□□□□□ -0.82
CACNA1C-205ENST00000399591 MRPL58Q14197 206 aaKnown RBP9.96□□□□□ -0.82
CACNA1C-205ENST00000399591 FAM74A4Q5TZK3 123 aa9.96□□□□□ -0.82
CACNA1C-205ENST00000399591 NUBPLQ8TB37 319 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms