RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 IRF3Q14653 427 aa18.88■□□□□ 0.61
ANKRD28-201ENST00000399451 Q1RN00 199 aa18.88■□□□□ 0.61
ANKRD28-201ENST00000399451 LINC00052Q96N35 136 aa18.88■□□□□ 0.61
ANKRD28-201ENST00000399451 TTC3P53804 2025 aa18.88■□□□□ 0.61
ANKRD28-201ENST00000399451 LEUTXA8MZ59 168 aa18.88■□□□□ 0.61
ANKRD28-201ENST00000399451 MBD1Q9UIS9 605 aaPredicted RBP18.88■□□□□ 0.61
ANKRD28-201ENST00000399451 SPINK4O60575 86 aa18.88■□□□□ 0.61
ANKRD28-201ENST00000399451 MANBALQ9NQG1 85 aa18.88■□□□□ 0.61
ANKRD28-201ENST00000399451 NTN1O95631 604 aa18.88■□□□□ 0.61
ANKRD28-201ENST00000399451 POLR2GP62487 172 aaKnown RBP eCLIP18.88■□□□□ 0.61
ANKRD28-201ENST00000399451 TUSC5Q8IXB3 177 aa18.88■□□□□ 0.61
ANKRD28-201ENST00000399451 OR6C3Q9NZP0 311 aa18.88■□□□□ 0.61
ANKRD28-201ENST00000399451 TEX50A0A1B0GTY4 177 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 LSM6P62312 80 aaKnown RBP18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 STPG1Q5TH74 334 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 SH2D2AQ9NP31 389 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 TMEM183BQ1AE95 376 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 FNDC7Q5VTL7 733 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 BLNKQ8WV28 456 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 PRR13Q9NZ81 148 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 ZNF107Q9UII5 783 aaPredicted RBP18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 C9orf62Q8N4C0 152 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 NRTNQ99748 197 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 WDR13Q9H1Z4 485 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 LPAR2Q9HBW0 351 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 SOCS1O15524 211 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 GATCO43716 136 aaKnown RBP18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 RASL10BQ96S79 203 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 SF3B5Q9BWJ5 86 aaKnown RBP18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 NAT8Q9UHE5 227 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 TRAV20A0A0B4J274 112 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 RAC3P60763 192 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 PMS2P11Q13670 270 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 ZNF596Q8TC21 504 aa18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 LYRM2Q9NU23 88 aaPredicted RBP18.87■□□□□ 0.61
ANKRD28-201ENST00000399451 LAMB2P55268 1798 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 ZNF716A6NP11 495 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 EML2O95834 649 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 FAM78BQ5VT40 261 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 SLC25A42Q86VD7 318 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 RSRP1Q9BUV0 290 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 GPR27Q9NS67 375 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 BVESQ8NE79 360 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 ASB5Q8WWX0 329 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 MS4A10Q96PG2 267 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 SLC52A3Q9NQ40 469 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 USP54Q70EL1 1684 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 DUXBA0A1W2PPF3 345 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 CRHP06850 196 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 FOXO1Q12778 655 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 SKP2Q13309 424 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 WDR73Q6P4I2 378 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 OR4C5Q8NGB2 326 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 OR11H7Q8NGC8 314 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 G0S2P27469 103 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 OR52L2PQ8NGH6 319 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 PTP4A1Q93096 173 aa18.86■□□□□ 0.61
ANKRD28-201ENST00000399451 CXCL3P19876 107 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 KLF9Q13886 244 aaPredicted RBP18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 OR10AC1Q8NH08 325 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 NPIPB8E9PQR5 432 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 CST2P09228 141 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 HLA-GP17693 338 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 OR5R1Q8NH85 324 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 OPN1MWP04001 364 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 OPN1MW2P0DN77 364 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 OPN1MW3P0DN78 364 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 BCL3P20749 454 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 PNRC1Q12796 327 aaPredicted RBP18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 Q9N2K0 584 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 CBY3A6NI87 242 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 ZNF205O95201 554 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 MOGAT3Q86VF5 341 aa18.85■□□□□ 0.61
ANKRD28-201ENST00000399451 TMEM97Q5BJF2 176 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 C1QL3Q5VWW1 255 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 SCN9AQ15858 1988 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 LANCL1O43813 399 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 HPXP02790 462 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 SPCS3P61009 180 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 NEU3Q9UQ49 428 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 C5orf67F2Z3F1 127 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 LYZP61626 148 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 COL19A1Q14993 1142 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 TCTEX1D1Q8N7M0 179 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 OR4S2Q8NH73 311 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 DYNLRB2Q8TF09 96 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 DLEC1Q9Y238 1755 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 ERVS71-1P61550 626 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 CLPPQ16740 277 aaPredicted RBP18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 OOEPA6NGQ2 149 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 TSPO2Q5TGU0 170 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 RNF2Q99496 336 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 DOK5Q9P104 306 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 LIPGQ9Y5X9 500 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 TMPRSS3P57727 454 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 AWAT1Q58HT5 328 aa18.84■□□□□ 0.61
ANKRD28-201ENST00000399451 GEMIN2O14893 280 aaKnown RBP18.83■□□□□ 0.61
ANKRD28-201ENST00000399451 PNPP00491 289 aa18.83■□□□□ 0.61
ANKRD28-201ENST00000399451 HTR1DP28221 377 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms