RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 OR2J2O76002 312 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 PKIAP61925 76 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 ADPRHL1Q8NDY3 354 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 RBM24Q9BX46 236 aaKnown RBP12.11□□□□□ -0.47
APOB-202ENST00000399256 TPSD1Q9BZJ3 242 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 CALHM2Q9HA72 323 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 ZNF286AQ9HBT8 521 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 TRDCB7Z8K6 153 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 TLX3O43711 291 aaPredicted RBP12.11□□□□□ -0.47
APOB-202ENST00000399256 PTGDSP41222 190 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 HLA-DRB3P79483 266 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 Q6ZPA2 131 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 ANKRD37Q7Z713 158 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 OR8G5Q8NG78 346 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 SNX22Q96L94 193 aa12.11□□□□□ -0.47
APOB-202ENST00000399256 PACRGQ96M98 296 aaPredicted RBP12.11□□□□□ -0.47
APOB-202ENST00000399256 UBE2J1Q9Y385 318 aaPredicted RBP12.11□□□□□ -0.47
APOB-202ENST00000399256 CNTRLQ7Z7A1 2325 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 TSTD3H0UI37 97 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 ETV2O00321 342 aaPredicted RBP12.1□□□□□ -0.47
APOB-202ENST00000399256 MPPED1O15442 326 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 ADAM20O43506 726 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 ZNF154Q13106 437 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 ZNF695Q8IW36 515 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 ODF3L1Q8IXM7 274 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 CMTM1Q8IZ96 169 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 LYRM2Q9NU23 88 aaPredicted RBP12.1□□□□□ -0.47
APOB-202ENST00000399256 GNG13Q9P2W3 67 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 IGKV1-12A0A0C4DH73 117 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 AQP7P3A6NL99 342 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 IGKV1D-12P01611 117 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 PGA5P0DJD9 388 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 FUT3P21217 361 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 RAB11AP62491 216 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 SLC25A53Q5H9E4 307 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 SPIN3Q5JUX0 258 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 SLC35E3Q7Z769 313 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 DPPA2Q7Z7J5 298 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 C1orf87Q8N0U7 546 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 NFAM1Q8NET5 270 aaPredicted RBP12.1□□□□□ -0.47
APOB-202ENST00000399256 SLC25A31Q9H0C2 315 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 CRLF2Q9HC73 371 aa12.1□□□□□ -0.47
APOB-202ENST00000399256 UNC13CQ8NB66 2214 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 TRIOO75962 3097 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 SLC31A2O15432 143 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 CDS2O95674 445 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 TMEM50AO95807 157 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 PPYP01298 95 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 CD200P41217 278 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 HIST2H3PS2Q5TEC6 136 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 LILRB2Q8N423 598 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 OR13D1Q8NGV5 346 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 CPNE4Q96A23 557 aaPredicted RBP12.09□□□□□ -0.47
APOB-202ENST00000399256 FGF21Q9NSA1 209 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 SPAG17Q6Q759 2223 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 TNFSF12O43508 249 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 TBC1D26Q86UD7 250 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 ZNF100Q8IYN0 542 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 NAT6Q93015 286 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 NABP1Q96AH0 204 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 ZNF385AQ96PM9 386 aaKnown RBP12.09□□□□□ -0.47
APOB-202ENST00000399256 TMEM222Q9H0R3 208 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 PRAMEF20Q5VT98 475 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 OR2M3Q8NG83 312 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 BORCS8Q96FH0 119 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 HIST1H2BLQ99880 126 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 SSX3Q99909 188 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 ST3GAL6Q9Y274 331 aa12.09□□□□□ -0.47
APOB-202ENST00000399256 IGHV1OR21-1A0A087WYE8 117 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 ZFP92A6NM28 416 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 ZNF732B4DXR9 585 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 MSX1P28360 303 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 IL2RGP31785 369 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 TLE4Q04727 773 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 SP5Q6BEB4 398 aaPredicted RBP12.08□□□□□ -0.48
APOB-202ENST00000399256 OSR2Q8N2R0 312 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 M1APQ8TC57 530 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 ZNF837Q96EG3 531 aaPredicted RBP12.08□□□□□ -0.48
APOB-202ENST00000399256 GNPNAT1Q96EK6 184 aaPredicted RBP12.08□□□□□ -0.48
APOB-202ENST00000399256 ZNF442Q9H7R0 627 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 SMCO3A2RU48 225 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 UCP3P55916 312 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 SHBQ15464 509 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 C17orf82Q86X59 251 aaPredicted RBP12.08□□□□□ -0.48
APOB-202ENST00000399256 SPTSSAQ969W0 71 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 SPSB1Q96BD6 273 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 RBMXL1Q96E39 390 aaKnown RBP12.08□□□□□ -0.48
APOB-202ENST00000399256 PRDM6Q9NQX0 595 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 TCFL5Q9UL49 500 aa12.08□□□□□ -0.48
APOB-202ENST00000399256 LOC102723971A0A1B0GUV8 181 aa12.07□□□□□ -0.48
APOB-202ENST00000399256 PHOX2AO14813 284 aa12.07□□□□□ -0.48
APOB-202ENST00000399256 GNRHRP30968 328 aa12.07□□□□□ -0.48
APOB-202ENST00000399256 OTX1P32242 354 aaPredicted RBP12.07□□□□□ -0.48
APOB-202ENST00000399256 TAS2R60P59551 318 aa12.07□□□□□ -0.48
APOB-202ENST00000399256 MPV17LQ2QL34 196 aa12.07□□□□□ -0.48
APOB-202ENST00000399256 ZNF880Q6PDB4 577 aa12.07□□□□□ -0.48
APOB-202ENST00000399256 SELENOHQ8IZQ5 122 aaKnown RBP12.07□□□□□ -0.48
APOB-202ENST00000399256 IL22RA1Q8N6P7 574 aa12.07□□□□□ -0.48
APOB-202ENST00000399256 H3BP45 60 aa12.07□□□□□ -0.48
APOB-202ENST00000399256 CD38P28907 300 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms