RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 RPS27AP62979 156 aaKnown RBP10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SCN1BQ07699 218 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SPCS2Q15005 226 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 MPV17LQ2QL34 196 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 LRRC10Q5BKY1 277 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 CLEC9AQ6UXN8 241 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 C1orf229Q6ZS94 237 aaPredicted RBP10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TCF23Q7RTU1 214 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 OR2W3Q7Z3T1 314 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 OR8H2Q8N162 312 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 C8orf46Q8TAG6 207 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 COQ2Q96H96 371 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TMEM59Q9BXS4 323 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM234AQ9H0X4 552 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 CST11Q9H112 138 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 PPA2Q9H2U2 334 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 DAPK2Q9UIK4 370 aa10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 RPUSD1Q9UJJ7 312 aaKnown RBP10.25□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SONP18583 2426 aaKnown RBP10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TRAV20A0A0B4J274 112 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 DEGS1O15121 323 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 OR7C1O76099 320 aaPredicted RBP10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 AVPP01185 164 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 NDUFB7P17568 137 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 GABRR1P24046 479 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 BLMHQ13867 455 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 BRICD5Q6PL45 260 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 Q71RC1 249 aaPredicted RBP10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 LINC00596Q86U02 117 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 GLCCI1Q86VQ1 547 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM89BQ8N5H3 189 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TPRX1Q8N7U7 411 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 CHST4Q8NCG5 386 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 OR5H6Q8NGV6 325 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 KCNG3Q8TAE7 436 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 PLPPR1Q8TBJ4 325 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 LGALS14Q8TCE9 139 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 RAB40AQ8WXH6 277 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TMPRSS13Q9BYE2 586 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 PCDHB16Q9NRJ7 776 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 OPN4Q9UHM6 478 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 INSIG2Q9Y5U4 225 aa10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 NSD1Q96L73 2696 aaPredicted RBP10.24□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SVEP1Q4LDE5 3571 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 MTORP42345 2549 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 KIR2DS1A0A191URI9 304 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A10PA6NDY2 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A18PA6NE21 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A16PA6NEW6 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A20PA6NIJ5 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A8PA6NJQ4 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A7PA6NKC0 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A22PA8MWA6 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A12PA8MX19 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A5PA8MXJ8 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A23PA8MXZ1 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 HSPB6O14558 160 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 MGST3O14880 152 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 GPR37O15354 613 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SOCS1O15524 211 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 CSN2P05814 226 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A15PP0C7V4 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A13PP0C7W8 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A14PP0C7W9 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FAM90A24PP0C7X0 464 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 CHATP28329 748 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TMBIM6P55061 237 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 PAX8Q06710 450 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 ZNF273Q14593 569 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 ATXN7L3Q14CW9 347 aaPredicted RBP10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 GRK1Q15835 563 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 C11orf91Q3C1V1 193 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 BPIFB2Q8N4F0 458 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SUMF2Q8NBJ7 301 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 OR4M1Q8NGD0 313 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 RAB2BQ8WUD1 216 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 H1FXQ92522 213 aaKnown RBP10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SLC25A46Q96AG3 418 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 ISOC1Q96CN7 298 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 SLC25A38Q96DW6 304 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 NUDT16L1Q9BRJ7 211 aaKnown RBP10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 DPCDQ9BVM2 203 aaPredicted RBP10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 DCSTAMPQ9H295 470 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 YAE1D1Q9NRH1 226 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 GLS2Q9UI32 602 aa10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 FN1P02751 2386 aaKnown RBP10.23□□□□□ -0.77
HLA-DQB1-203ENST00000399082 MEX3AA1L020 520 aaKnown RBP10.22□□□□□ -0.77
HLA-DQB1-203ENST00000399082 H3BMQ9 156 aa10.22□□□□□ -0.77
HLA-DQB1-203ENST00000399082 ENSAO43768 121 aaKnown RBP10.22□□□□□ -0.77
HLA-DQB1-203ENST00000399082 ECDO95905 644 aaPredicted RBP10.22□□□□□ -0.77
HLA-DQB1-203ENST00000399082 MMP9P14780 707 aa10.22□□□□□ -0.77
HLA-DQB1-203ENST00000399082 GLIPR1P48060 266 aa10.22□□□□□ -0.77
HLA-DQB1-203ENST00000399082 P2RX3P56373 397 aa10.22□□□□□ -0.77
HLA-DQB1-203ENST00000399082 TMEM50BP56557 158 aa10.22□□□□□ -0.77
HLA-DQB1-203ENST00000399082 PAX5Q02548 391 aa10.22□□□□□ -0.77
HLA-DQB1-203ENST00000399082 AESQ08117 197 aa10.22□□□□□ -0.77
HLA-DQB1-203ENST00000399082 EDDM3AQ14507 147 aa10.22□□□□□ -0.77
HLA-DQB1-203ENST00000399082 MOGAT2Q3SYC2 334 aa10.22□□□□□ -0.77
HLA-DQB1-203ENST00000399082 PAN3Q58A45 887 aaKnown RBP10.22□□□□□ -0.77
HLA-DQB1-203ENST00000399082 IDNKQ5T6J7 187 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms