RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 TAAR9Q96RI9 348 aa12.85□□□□□ -0.35
RPRD1A-202ENST00000399022 KIAA1456Q9P272 454 aa12.85□□□□□ -0.35
RPRD1A-202ENST00000399022 CACFD1Q9UGQ2 172 aa12.85□□□□□ -0.35
RPRD1A-202ENST00000399022 PRSS50Q9UI38 385 aa12.85□□□□□ -0.35
RPRD1A-202ENST00000399022 CTAG1AP78358 180 aa12.85□□□□□ -0.35
RPRD1A-202ENST00000399022 RUNX1Q01196 453 aa12.85□□□□□ -0.35
RPRD1A-202ENST00000399022 MGAT2Q10469 447 aa12.85□□□□□ -0.35
RPRD1A-202ENST00000399022 ANKRD37Q7Z713 158 aa12.85□□□□□ -0.35
RPRD1A-202ENST00000399022 CNEP1R1Q8N9A8 125 aa12.85□□□□□ -0.35
RPRD1A-202ENST00000399022 ZNRF4Q8WWF5 429 aa12.85□□□□□ -0.35
RPRD1A-202ENST00000399022 MYOTQ9UBF9 498 aa12.85□□□□□ -0.35
RPRD1A-202ENST00000399022 ANKRD30BLA7E2S9 258 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 TNFSF11O14788 317 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 ZNF737O75373 536 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 EDN3P14138 238 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 KHDC3LQ587J8 217 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 KDF1Q8NAX2 398 aaPredicted RBP12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 UTP23Q9BRU9 249 aaKnown RBP12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 A0A087WV48 116 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 UBE2L5PA0A1B0GUS4 154 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 APCDD1LQ8NCL9 501 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 TECTBQ96PL2 329 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 TBX15Q96SF7 602 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 PPP1R3CQ9UQK1 317 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 A0A096LPE4 126 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 A0A1W2PPZ6 126 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 B4GALT1P15291 398 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 DPPA3Q6W0C5 159 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 SHISA5Q8N114 240 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 KLHDC1Q8N7A1 406 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 OR10J5Q8NHC4 309 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 Q9N2K0 584 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 ANXA10Q9UJ72 324 aa12.84□□□□□ -0.35
RPRD1A-202ENST00000399022 A6NCN8 305 aa12.83□□□□□ -0.35
RPRD1A-202ENST00000399022 DHHO43323 396 aa12.83□□□□□ -0.35
RPRD1A-202ENST00000399022 FHL5Q5TD97 284 aa12.83□□□□□ -0.35
RPRD1A-202ENST00000399022 RDH5Q92781 318 aa12.83□□□□□ -0.35
RPRD1A-202ENST00000399022 PECRQ9BY49 303 aa12.83□□□□□ -0.35
RPRD1A-202ENST00000399022 C5orf66Q9H5L9 145 aa12.83□□□□□ -0.35
RPRD1A-202ENST00000399022 A0A1W2PPE3 182 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 LMX1BO60663 402 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 LIAT1Q6ZQX7 453 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 C12orf49Q9H741 205 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 LANCL2Q9NS86 450 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 LHX6Q9UPM6 363 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 A0A1W2PR80 420 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 HS3ST1O14792 307 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 VAMP5O95183 116 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 PGA3P0DJD8 388 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 COX5AP20674 150 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 BMP5P22003 454 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 ERVK-16P61578 105 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 RPS16P62249 146 aaKnown RBP12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 ZNF154Q13106 437 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 LINC01590Q5TEZ4 76 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 OR10AD1Q8NGE0 317 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 OR13G1Q8NGZ3 307 aa12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 MTCL1Q9Y4B5 1905 aaKnown RBP12.83□□□□□ -0.36
RPRD1A-202ENST00000399022 C3orf85A0A1B0GTC6 90 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 SPCS3P61009 180 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 CMTM2Q8TAZ6 248 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 SH3BGRL3Q9H299 93 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 SLC25A22Q9H936 323 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 MTCH2Q9Y6C9 303 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 DEDDO75618 318 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 NRASP01111 189 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 HIST1H1BP16401 226 aaKnown RBP12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 SLC25A26Q70HW3 274 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 NOXO1Q8NFA2 376 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 RAB24Q969Q5 203 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 SMOC1Q9H4F8 434 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 SMDT1Q9H4I9 107 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 SLC2A8Q9NY64 477 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 NAT8Q9UHE5 227 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 NLRC5Q86WI3 1866 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 LRP5LA4QPB2 252 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 CLEC18AA5D8T8 446 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 H3BMH7 237 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 FGF16O43320 207 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 RND3P61587 244 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 PAX5Q02548 391 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 CLEC18CQ8NCF0 446 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 MCHR2Q969V1 340 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 PINX1Q96BK5 328 aaKnown RBP12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 CTHRC1Q96CG8 243 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 FAM117AQ9C073 453 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 GPR179Q6PRD1 2367 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 FABP6P51161 128 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 SUMO3P55854 103 aaPredicted RBP12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 CATR1Q13166 79 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 WDR25Q64LD2 544 aaPredicted RBP12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 RHBDD2Q6NTF9 364 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 OSR2Q8N2R0 312 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 OR10P1Q8NGE3 313 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 PP6455Q8WZ26 134 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 EXTL1Q92935 676 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 PTX4Q96A99 478 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 SLC2A9Q9NRM0 540 aa12.82□□□□□ -0.36
RPRD1A-202ENST00000399022 SPINK4O60575 86 aa12.81□□□□□ -0.36
RPRD1A-202ENST00000399022 OR10J1P30954 320 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms