RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 OR2W3Q7Z3T1 314 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 ASB10Q8WXI3 467 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 DCAF16Q9NXF7 216 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 PJVKQ0ZLH3 352 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 C11orf87Q6NUJ2 197 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 RNASEKQ6P5S7 137 aaKnown RBP12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 TRAPPC4Q9Y296 219 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 HRKO00198 91 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 IGHA1P01876 353 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 RNF224P0DH78 156 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 BCL3P20749 454 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 TPPP2P59282 170 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 NHLRC1Q6VVB1 395 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 MOB1BQ7L9L4 216 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 ASB13Q8WXK3 278 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 ZNHIT1O43257 154 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 MIDNQ504T8 468 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 ATP1A1-AS1Q5TC04 95 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 OR8B12Q8NGG6 310 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 UQCC2Q9BRT2 126 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 TRIOBPQ9H2D6 2365 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 RNF7Q9UBF6 113 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 SEMA7AO75326 666 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 ADRA2AP08913 450 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 SCGB1C2P0DMR2 95 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 TUSC1Q2TAM9 212 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 C1QL3Q5VWW1 255 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 ARRDC1Q8N5I2 433 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 GVQW1Q8N7I0 195 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 VSTM2LQ96N03 204 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 UCN2Q96RP3 112 aa12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 NXF2Q9GZY0 626 aaKnown RBP12.53□□□□□ -0.4
PCDHA11-201ENST00000398640 FOXS1O43638 330 aa12.52□□□□□ -0.4
PCDHA11-201ENST00000398640 OR5AC1P0C628 307 aa12.52□□□□□ -0.4
PCDHA11-201ENST00000398640 FGF8P55075 233 aaPredicted RBP12.52□□□□□ -0.4
PCDHA11-201ENST00000398640 ZNF429Q86V71 674 aa12.52□□□□□ -0.4
PCDHA11-201ENST00000398640 OR5C1Q8NGR4 320 aa12.52□□□□□ -0.4
PCDHA11-201ENST00000398640 RHOFQ9HBH0 211 aa12.52□□□□□ -0.4
PCDHA11-201ENST00000398640 OR6C3Q9NZP0 311 aa12.52□□□□□ -0.4
PCDHA11-201ENST00000398640 CLN8Q9UBY8 286 aa12.52□□□□□ -0.4
PCDHA11-201ENST00000398640 TRAPPC1Q9Y5R8 145 aa12.52□□□□□ -0.4
PCDHA11-201ENST00000398640 ETV3LQ6ZN32 361 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 COMMD1Q8N668 190 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 VWCEQ96DN2 955 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 MSL2Q9HCI7 577 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 FKBP11Q9NYL4 201 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 UFC1Q9Y3C8 167 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 FAM24AA6NFZ4 105 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 CELA2AP08217 269 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 KIR2DS2P43631 304 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 TRAT1Q6PIZ9 186 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 TGIF2LYQ8IUE0 185 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 ZNF275Q9NSD4 429 aaPredicted RBP12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 RABAC1Q9UI14 185 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 TMEFF2Q9UIK5 374 aaPredicted RBP12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 YTHDF2Q9Y5A9 579 aaKnown RBP12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 AUP1Q9Y679 476 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 CDIPTO14735 213 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 CRXO43186 299 aaPredicted RBP12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 SFTA3P0C7M3 94 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 RNF165Q6ZSG1 346 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 OIT3Q8WWZ8 545 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 CXorf58Q96LI9 332 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 NOL4LQ96MY1 436 aaPredicted RBP12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 AKIP1Q9NQ31 210 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 RASL12Q9NYN1 266 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 RNF24Q9Y225 148 aa12.52□□□□□ -0.41
PCDHA11-201ENST00000398640 KCNJ3P48549 501 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 CD226Q15762 336 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 ST3GAL2Q16842 350 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 LINC00052Q96N35 136 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 ARID2Q68CP9 1835 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 TIAL1Q01085 375 aaKnown RBP eCLIP12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 PPP1R1AQ13522 171 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 SLC25A40Q8TBP6 338 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 PTP4A1Q93096 173 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 MS4A5Q9H3V2 200 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 HEXA-AS1Q9H8Q6 139 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 A0A1W2PQD3 144 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 DNPH1O43598 174 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 NEIL1Q96FI4 390 aaPredicted RBP12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 GPR137Q96N19 417 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 SCN5AQ14524 2016 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 GLDNQ6ZMI3 551 aaPredicted RBP12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 FLRT3Q9NZU0 649 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 LIPGQ9Y5X9 500 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 PDCD6O75340 191 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 CTAG2O75638 210 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 GNG4P50150 75 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 OR10AC1Q8NH08 325 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 MED30Q96HR3 178 aa12.51□□□□□ -0.41
PCDHA11-201ENST00000398640 GATCO43716 136 aaKnown RBP12.5□□□□□ -0.41
PCDHA11-201ENST00000398640 HSBP1O75506 76 aa12.5□□□□□ -0.41
PCDHA11-201ENST00000398640 HAND1O96004 215 aa12.5□□□□□ -0.41
PCDHA11-201ENST00000398640 CD200P41217 278 aa12.5□□□□□ -0.41
PCDHA11-201ENST00000398640 MRPS11P82912 194 aaKnown RBP12.5□□□□□ -0.41
PCDHA11-201ENST00000398640 ZNF141Q15928 474 aa12.5□□□□□ -0.41
PCDHA11-201ENST00000398640 IL17BQ9UHF5 180 aa12.5□□□□□ -0.41
PCDHA11-201ENST00000398640 MGAMO43451 1857 aa12.5□□□□□ -0.41
PCDHA11-201ENST00000398640 CROCCQ5TZA2 2017 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms