RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 RDH5Q92781 318 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 LOXL2Q9Y4K0 774 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 COL11A1P12107 1806 aaPredicted RBP4.31□□□□□ -1.72
SMAD4-202ENST00000398417 DAOP14920 347 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 PLP2Q04941 152 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 C6orf15Q6UXA7 325 aaPredicted RBP4.31□□□□□ -1.72
SMAD4-202ENST00000398417 LYZL2Q7Z4W2 148 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 C17orf82Q86X59 251 aaPredicted RBP4.31□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM217Q8N7C4 229 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 CCDC71LQ8N9Z2 235 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 OR10Z1Q8NGY1 313 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 EXTL1Q92935 676 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 ESRP2Q9H6T0 727 aaKnown RBP4.31□□□□□ -1.72
SMAD4-202ENST00000398417 FANCFQ9NPI8 374 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF175Q9Y473 711 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 CCDC187A0A096LP49 1063 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 IGKV1-9A0A0C4DH69 117 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 ANKRD30BLA7E2S9 258 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 E9PLN8 166 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 LDLRAD4O15165 306 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 NRASP01111 189 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 PABPC1L2AQ5JQF8 200 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 SLC25A26Q70HW3 274 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 MKXQ8IYA7 352 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 OR1F12Q8NHA8 337 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 SGCZQ96LD1 299 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 SPSB2Q99619 263 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 RTBDNQ9BSG5 229 aaPredicted RBP4.31□□□□□ -1.72
SMAD4-202ENST00000398417 CYTL1Q9NRR1 136 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 B3GAT1Q9P2W7 334 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 CYB5R1Q9UHQ9 305 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 AMDHD2Q9Y303 409 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 HDGFL3Q9Y3E1 203 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 LOC389332A0A1B0GUA5 103 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 MPTX1A8MV57 137 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 TRAPPC2LH3BP13 241 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 SIRPB1O00241 398 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 GPR137BO60478 399 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 DUS4LO95620 317 aaKnown RBP4.31□□□□□ -1.72
SMAD4-202ENST00000398417 PDGFBP01127 241 aaPredicted RBP4.31□□□□□ -1.72
SMAD4-202ENST00000398417 ISG15P05161 165 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 STAG3L3P0CL85 134 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 CSRP1P21291 193 aaKnown RBP4.31□□□□□ -1.72
SMAD4-202ENST00000398417 SNAI3Q3KNW1 292 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 C14orf79Q96F83 325 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 LURAP1Q96LR2 239 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 RPH3ALQ9UNE2 315 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 IGHV1-45A0A0A0MS14 117 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF44P15621 663 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 PIGPP57054 158 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 B2MP61769 119 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 FLI1Q01543 452 aaPredicted RBP4.31□□□□□ -1.72
SMAD4-202ENST00000398417 UBE2V2Q15819 145 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 IGFBP7Q16270 282 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 PIGYQ3MUY2 71 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 LHFPL2Q6ZUX7 228 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 LDLRAD3Q86YD5 345 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 OR56B2PQ8NGI1 322 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 OR51H1Q8NH63 302 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 TIMD4Q96H15 378 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 AKR1E2Q96JD6 320 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 ANGPTL4Q9BY76 406 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 TREM2Q9NZC2 230 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 R4GN57 208 aa4.31□□□□□ -1.72
SMAD4-202ENST00000398417 PLXNA1Q9UIW2 1896 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 COL4A3Q01955 1670 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 A0A1W2PNV4 684 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 CD300LBA8K4G0 201 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 C3orf80F5H4A9 247 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 GEMIN2O14893 280 aaKnown RBP4.3□□□□□ -1.72
SMAD4-202ENST00000398417 IGHEP01854 428 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 SERPINA7P05543 415 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF14P17017 642 aaPredicted RBP4.3□□□□□ -1.72
SMAD4-202ENST00000398417 DUSP1P28562 367 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 CASP6P55212 293 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 GPR157Q5UAW9 335 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 NUP37Q8NFH4 326 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 FBXO17Q96EF6 278 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 COL25A1Q9BXS0 654 aaPredicted RBP4.3□□□□□ -1.72
SMAD4-202ENST00000398417 CRLF2Q9HC73 371 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 OSGIN2Q9Y236 505 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 MEX3AA1L020 520 aaKnown RBP4.3□□□□□ -1.72
SMAD4-202ENST00000398417 IAPPP10997 89 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 SOX8P57073 446 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 SELENOVP59797 346 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 RPL11P62913 178 aaKnown RBP4.3□□□□□ -1.72
SMAD4-202ENST00000398417 SRSF7Q16629 238 aaKnown RBP eCLIP4.3□□□□□ -1.72
SMAD4-202ENST00000398417 COPS9Q8WXC6 57 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM54Q969K7 222 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 PTX4Q96A99 478 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 GRAMD2BQ96HH9 432 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 PRDM6Q9NQX0 595 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 LOC102725191A0A1B0GVB3 256 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 TAAR5O14804 337 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 CBR3O75828 277 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 ATG12O94817 140 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 OR10J4P0C629 311 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 BCL3P20749 454 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM33P57088 247 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 PSG4Q00888 419 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms